Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 IMPDH1P4-201ENST00000445028 1534 ntBASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 AL133267.1-201ENST00000398220 340 ntBASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 AC005237.2-201ENST00000434368 219 ntBASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 NMU-202ENST00000505262 693 ntTSL 3 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 AC003101.2-201ENST00000612557 442 ntBASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 AL035456.1-201ENST00000456064 1369 ntBASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CDC42SE2Q9NRR3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 HTR5BP-201ENST00000430851 1154 ntBASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 FDX1P1-201ENST00000449115 551 ntBASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 SLED1-202ENST00000512051 380 ntBASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 MTDHP5-201ENST00000598980 586 ntBASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 RN7SL828P-201ENST00000607615 303 ntBASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 AL133215.2-201ENST00000609242 977 ntBASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 MTHFR-210ENST00000641407 2387 ntBASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms