Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 AC092552.1-201ENST00000547243 906 ntBASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 BRI3BPP1-201ENST00000594224 787 ntBASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 CHCHD2P3-201ENST00000603038 451 ntBASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 AC133539.2-201ENST00000604757 467 ntBASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 AC093813.1-201ENST00000605066 256 ntBASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 AC098614.1-201ENST00000368528 745 ntBASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 SPDYE22P-201ENST00000582158 798 ntBASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 AC008494.3-201ENST00000606615 944 ntBASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.17□□□□□ -0.14
SDHAF3Q9NRP4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SDHAF3Q9NRP4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms