Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 AC010894.2-201ENST00000444196 561 ntTSL 3 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 RPS18P9-201ENST00000482817 460 ntBASIC13.93□□□□□ -0.18
CHD8Q9HCK8 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 MIR3188-201ENST00000583494 85 ntBASIC13.93□□□□□ -0.18
CHD8Q9HCK8 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.93□□□□□ -0.18
CHD8Q9HCK8 AC006449.5-201ENST00000610658 2098 ntBASIC13.93□□□□□ -0.18
CHD8Q9HCK8 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 RN7SL602P-201ENST00000578326 324 ntBASIC13.92□□□□□ -0.18
CHD8Q9HCK8 RN7SL718P-201ENST00000581254 303 ntBASIC13.92□□□□□ -0.18
CHD8Q9HCK8 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 VENTXP4-201ENST00000449029 958 ntBASIC13.92□□□□□ -0.18
CHD8Q9HCK8 RHOQP2-201ENST00000449922 579 ntBASIC13.92□□□□□ -0.18
CHD8Q9HCK8 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 AC022121.1-201ENST00000484584 579 ntBASIC13.92□□□□□ -0.18
CHD8Q9HCK8 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 HERC2P11-201ENST00000562845 725 ntBASIC13.92□□□□□ -0.18
CHD8Q9HCK8 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 AC100756.2-201ENST00000569537 736 ntBASIC13.92□□□□□ -0.18
CHD8Q9HCK8 AC006116.2-201ENST00000589958 988 ntBASIC13.92□□□□□ -0.18
CHD8Q9HCK8 AC079331.1-201ENST00000623200 1200 ntBASIC13.92□□□□□ -0.18
CHD8Q9HCK8 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 AC011477.6-201ENST00000604980 1927 ntBASIC13.92□□□□□ -0.18
CHD8Q9HCK8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHD8Q9HCK8 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 PPIA-208ENST00000489459 907 ntTSL 2 BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 BCRP4-201ENST00000506079 804 ntBASIC13.91□□□□□ -0.18
CHD8Q9HCK8 DUX4L47-201ENST00000566374 394 ntBASIC13.91□□□□□ -0.18
CHD8Q9HCK8 FBXO36P1-201ENST00000579006 471 ntBASIC13.91□□□□□ -0.18
CHD8Q9HCK8 PPIA-210ENST00000620047 827 ntTSL 5 BASIC13.91□□□□□ -0.18
CHD8Q9HCK8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms