Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH9Q9HC56 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH9Q9HC56 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH9Q9HC56 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH9Q9HC56 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH9Q9HC56 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH9Q9HC56 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH9Q9HC56 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH9Q9HC56 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.93■□□□□ 0.14
PCDH9Q9HC56 AL355385.1-201ENST00000606123 409 ntBASIC15.93■□□□□ 0.14
PCDH9Q9HC56 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.93■□□□□ 0.14
PCDH9Q9HC56 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH9Q9HC56 AL645728.2-202ENST00000641679 227 ntBASIC15.93■□□□□ 0.14
PCDH9Q9HC56 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDH9Q9HC56 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH9Q9HC56 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH9Q9HC56 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH9Q9HC56 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH9Q9HC56 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PCDH9Q9HC56 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH9Q9HC56 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PCDH9Q9HC56 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PCDH9Q9HC56 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH9Q9HC56 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH9Q9HC56 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 MRPS18AP1-201ENST00000414458 589 ntBASIC15.92■□□□□ 0.14
PCDH9Q9HC56 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 LINC01115-203ENST00000606068 577 ntBASIC15.92■□□□□ 0.14
PCDH9Q9HC56 AC008738.7-201ENST00000609744 511 ntBASIC15.92■□□□□ 0.14
PCDH9Q9HC56 AC004461.2-201ENST00000629517 803 ntBASIC15.92■□□□□ 0.14
PCDH9Q9HC56 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 AC007686.3-201ENST00000619017 3487 ntBASIC15.92■□□□□ 0.14
PCDH9Q9HC56 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDH9Q9HC56 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 AC104457.1-201ENST00000401024 814 ntBASIC15.91■□□□□ 0.14
PCDH9Q9HC56 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 KRT18P64-201ENST00000434946 1219 ntBASIC15.91■□□□□ 0.14
PCDH9Q9HC56 AC114501.2-201ENST00000439631 535 ntBASIC15.91■□□□□ 0.14
PCDH9Q9HC56 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.91■□□□□ 0.14
PCDH9Q9HC56 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 AC004840.1-201ENST00000636359 365 ntBASIC15.91■□□□□ 0.14
PCDH9Q9HC56 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 AC005912.2-201ENST00000619492 2400 ntBASIC15.91■□□□□ 0.14
PCDH9Q9HC56 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDH9Q9HC56 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms