Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 AJ011931.1-201ENST00000618749 2492 ntBASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 FAM8A3P-201ENST00000427218 844 ntBASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 AL512638.1-201ENST00000457493 794 ntBASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 AC008738.7-201ENST00000609744 511 ntBASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 AC106028.4-201ENST00000614509 607 ntBASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC40Q9H9A6 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 AP000845.1-201ENST00000581677 2131 ntBASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 OR2I1P-209ENST00000641730 5365 ntBASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 SRD5A3P1-201ENST00000603021 949 ntBASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 GPALPP1-207ENST00000611650 899 ntBASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC40Q9H9A6 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
LRRC40Q9H9A6 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
LRRC40Q9H9A6 REXO1L4P-201ENST00000605109 1937 ntBASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 AC007292.2-201ENST00000593524 1812 ntBASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 BASP1P1-201ENST00000430708 665 ntBASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 SPDYE18-201ENST00000510091 1050 ntBASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms