Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 AC005730.2-201ENST00000564549 1184 ntBASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 AF254983.2-201ENST00000612331 135 ntBASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 ALOX12P2-203ENST00000570921 1945 ntBASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
UBE2OQ9C0C9 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 MIR1227-201ENST00000408484 88 ntBASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 AC245100.5-201ENST00000452108 331 ntBASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 AC025181.2-201ENST00000606994 802 ntBASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 AP001065.2-201ENST00000617205 644 ntBASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2OQ9C0C9 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
UBE2OQ9C0C9 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms