Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC067863.1-201ENST00000494933 530 ntBASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 AC023310.3-201ENST00000557027 670 ntBASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 AC100756.1-201ENST00000562736 682 ntBASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 AC138749.3-201ENST00000567691 622 ntBASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 AC116165.1-201ENST00000611806 668 ntBASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 AL390754.1-201ENST00000619088 582 ntBASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 AL137783.1-201ENST00000623494 1896 ntBASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 AL353779.1-201ENST00000434793 351 ntBASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 FAM86GP-201ENST00000448322 971 ntBASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 AC026410.3-201ENST00000514280 936 ntBASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 AC135586.1-201ENST00000539323 574 ntBASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 TIMM17BP1-201ENST00000545713 516 ntBASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 MIR8072-201ENST00000614241 80 ntBASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 AC079781.4-201ENST00000641908 219 ntBASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 AL158070.2-201ENST00000623713 1621 ntBASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 HSPA7-201ENST00000445535 1927 ntBASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RSPO3Q9BXY4 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 AL928921.2-201ENST00000641325 2442 ntBASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms