Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.08□□□□□ -0.31
SEC22CQ9BRL7 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
SEC22CQ9BRL7 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SEC22CQ9BRL7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SEC22CQ9BRL7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.08□□□□□ -0.31
SEC22CQ9BRL7 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 AL691432.1-201ENST00000596308 1422 ntBASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 AP002383.4-201ENST00000442518 975 ntBASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 TSSC2-201ENST00000450217 709 ntBASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 RPS15P9-201ENST00000494093 319 ntBASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 AC104819.1-201ENST00000504587 486 ntBASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 AP002414.4-201ENST00000589764 1148 ntBASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SEC22CQ9BRL7 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 AC023090.2-201ENST00000625182 2110 ntBASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 AC073439.1-201ENST00000624121 1774 ntBASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 CICP16-201ENST00000502609 2813 ntBASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 AC106795.1-205ENST00000512851 1056 ntBASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 MTDHP4-201ENST00000600287 670 ntBASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 NUTM2HP-201ENST00000442076 2498 ntBASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 AC019294.4-201ENST00000561777 2905 ntBASIC13.07□□□□□ -0.32
SEC22CQ9BRL7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms