Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RAD9AQ99638 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAD9AQ99638 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.26■□□□□ 0.19
RAD9AQ99638 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAD9AQ99638 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAD9AQ99638 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
RAD9AQ99638 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAD9AQ99638 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAD9AQ99638 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAD9AQ99638 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RAD9AQ99638 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAD9AQ99638 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAD9AQ99638 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAD9AQ99638 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.25■□□□□ 0.19
RAD9AQ99638 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.25■□□□□ 0.19
RAD9AQ99638 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.25■□□□□ 0.19
RAD9AQ99638 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAD9AQ99638 AL355334.1-201ENST00000417713 215 ntBASIC16.25■□□□□ 0.19
RAD9AQ99638 FGFR3P1-201ENST00000449999 601 ntBASIC16.25■□□□□ 0.19
RAD9AQ99638 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.25■□□□□ 0.19
RAD9AQ99638 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.25■□□□□ 0.19
RAD9AQ99638 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.25■□□□□ 0.19
RAD9AQ99638 AC116345.2-201ENST00000512837 523 ntBASIC16.25■□□□□ 0.19
RAD9AQ99638 AL160314.3-201ENST00000556041 767 ntBASIC16.25■□□□□ 0.19
RAD9AQ99638 AC242376.1-201ENST00000559033 726 ntBASIC16.25■□□□□ 0.19
RAD9AQ99638 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.25■□□□□ 0.19
RAD9AQ99638 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAD9AQ99638 AL132994.2-201ENST00000603120 687 ntBASIC16.25■□□□□ 0.19
RAD9AQ99638 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.25■□□□□ 0.19
RAD9AQ99638 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.25■□□□□ 0.19
RAD9AQ99638 AC002472.3-201ENST00000640124 621 ntBASIC16.25■□□□□ 0.19
RAD9AQ99638 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAD9AQ99638 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAD9AQ99638 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.25■□□□□ 0.19
RAD9AQ99638 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAD9AQ99638 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
RAD9AQ99638 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAD9AQ99638 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RAD9AQ99638 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAD9AQ99638 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAD9AQ99638 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAD9AQ99638 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.25■□□□□ 0.19
RAD9AQ99638 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RAD9AQ99638 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.25■□□□□ 0.19
RAD9AQ99638 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAD9AQ99638 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
RAD9AQ99638 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAD9AQ99638 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.25■□□□□ 0.19
RAD9AQ99638 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RAD9AQ99638 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RAD9AQ99638 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
RAD9AQ99638 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAD9AQ99638 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.24■□□□□ 0.19
RAD9AQ99638 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RAD9AQ99638 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAD9AQ99638 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAD9AQ99638 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAD9AQ99638 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RAD9AQ99638 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAD9AQ99638 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAD9AQ99638 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAD9AQ99638 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.24■□□□□ 0.19
RAD9AQ99638 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAD9AQ99638 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAD9AQ99638 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAD9AQ99638 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAD9AQ99638 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAD9AQ99638 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAD9AQ99638 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAD9AQ99638 RN7SKP175-201ENST00000408472 289 ntBASIC16.24■□□□□ 0.19
RAD9AQ99638 HLA-K-203ENST00000430151 1046 ntBASIC16.24■□□□□ 0.19
RAD9AQ99638 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.24■□□□□ 0.19
RAD9AQ99638 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.24■□□□□ 0.19
RAD9AQ99638 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RAD9AQ99638 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.24■□□□□ 0.19
RAD9AQ99638 PGAM1P5-201ENST00000548011 764 ntBASIC16.24■□□□□ 0.19
RAD9AQ99638 DUX4L46-201ENST00000566845 751 ntBASIC16.24■□□□□ 0.19
RAD9AQ99638 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RAD9AQ99638 RN7SL736P-201ENST00000613111 269 ntBASIC16.24■□□□□ 0.19
RAD9AQ99638 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.24■□□□□ 0.19
RAD9AQ99638 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.24■□□□□ 0.19
RAD9AQ99638 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAD9AQ99638 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RAD9AQ99638 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAD9AQ99638 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAD9AQ99638 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAD9AQ99638 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.24■□□□□ 0.19
RAD9AQ99638 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RAD9AQ99638 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAD9AQ99638 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAD9AQ99638 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAD9AQ99638 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAD9AQ99638 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAD9AQ99638 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
RAD9AQ99638 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAD9AQ99638 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAD9AQ99638 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RAD9AQ99638 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RAD9AQ99638 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAD9AQ99638 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms