Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
ZNF48Q96MX3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 BRWD1P1-201ENST00000401091 371 ntBASIC12.55□□□□□ -0.4
ZNF48Q96MX3 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 AC026954.1-201ENST00000429771 1293 ntBASIC12.55□□□□□ -0.4
ZNF48Q96MX3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 AC022137.2-201ENST00000503482 481 ntBASIC12.55□□□□□ -0.4
ZNF48Q96MX3 AP001582.1-201ENST00000525856 295 ntBASIC12.55□□□□□ -0.4
ZNF48Q96MX3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF48Q96MX3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC12.54□□□□□ -0.4
ZNF48Q96MX3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 AC092384.3-202ENST00000564646 2873 ntBASIC12.54□□□□□ -0.4
ZNF48Q96MX3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 AC093813.1-201ENST00000605066 256 ntBASIC12.54□□□□□ -0.4
ZNF48Q96MX3 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 AC020658.6-201ENST00000623564 1870 ntBASIC12.54□□□□□ -0.4
ZNF48Q96MX3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.54□□□□□ -0.4
ZNF48Q96MX3 AC126177.1-201ENST00000547829 2218 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms