Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 AC079781.3-201ENST00000449110 356 ntBASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 PDPK2P-202ENST00000562415 1191 ntBASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NSMCE2Q96MF7 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 AL135744.1-201ENST00000565098 629 ntBASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
NSMCE2Q96MF7 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.58□□□□□ -0.07
NSMCE2Q96MF7 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NSMCE2Q96MF7 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
NSMCE2Q96MF7 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
NSMCE2Q96MF7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NSMCE2Q96MF7 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NSMCE2Q96MF7 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.58□□□□□ -0.08
NSMCE2Q96MF7 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NSMCE2Q96MF7 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NSMCE2Q96MF7 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NSMCE2Q96MF7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NSMCE2Q96MF7 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NSMCE2Q96MF7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
NSMCE2Q96MF7 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NSMCE2Q96MF7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NSMCE2Q96MF7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NSMCE2Q96MF7 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.58□□□□□ -0.08
NSMCE2Q96MF7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NSMCE2Q96MF7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NSMCE2Q96MF7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.58□□□□□ -0.08
NSMCE2Q96MF7 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.58□□□□□ -0.08
NSMCE2Q96MF7 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms