Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 MRPL3P1-201ENST00000400109 1033 ntBASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 AC079776.4-201ENST00000511039 504 ntBASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 MIR7706-201ENST00000613747 67 ntBASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 AC099521.3-201ENST00000624251 2938 ntBASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHMP6Q96FZ7 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHMP6Q96FZ7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHMP6Q96FZ7 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHMP6Q96FZ7 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHMP6Q96FZ7 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CHMP6Q96FZ7 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHMP6Q96FZ7 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.58■□□□□ 0.09
CHMP6Q96FZ7 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 AL662844.1-201ENST00000546340 181 ntBASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 ACTL9-202ENST00000612068 1252 ntBASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 AC116407.3-201ENST00000623905 1129 ntBASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.58■□□□□ 0.08
CHMP6Q96FZ7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 AC027612.1-201ENST00000445234 2395 ntBASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms