Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
RHBDF1Q96CC6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RHBDF1Q96CC6 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RHBDF1Q96CC6 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.01□□□□□ -0.01
RHBDF1Q96CC6 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
RHBDF1Q96CC6 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.01□□□□□ -0.01
RHBDF1Q96CC6 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.01□□□□□ -0.01
RHBDF1Q96CC6 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.01□□□□□ -0.01
RHBDF1Q96CC6 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RHBDF1Q96CC6 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RHBDF1Q96CC6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RHBDF1Q96CC6 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RHBDF1Q96CC6 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDF1Q96CC6 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDF1Q96CC6 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15□□□□□ -0.01
RHBDF1Q96CC6 AL359258.3-201ENST00000622910 2331 ntBASIC15□□□□□ -0.01
RHBDF1Q96CC6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDF1Q96CC6 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15□□□□□ -0.01
RHBDF1Q96CC6 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDF1Q96CC6 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15□□□□□ -0.01
RHBDF1Q96CC6 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15□□□□□ -0.01
RHBDF1Q96CC6 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RHBDF1Q96CC6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDF1Q96CC6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDF1Q96CC6 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15□□□□□ -0.01
RHBDF1Q96CC6 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDF1Q96CC6 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15□□□□□ -0.01
RHBDF1Q96CC6 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15□□□□□ -0.01
RHBDF1Q96CC6 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15□□□□□ -0.01
RHBDF1Q96CC6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDF1Q96CC6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15□□□□□ -0.01
RHBDF1Q96CC6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15□□□□□ -0.01
RHBDF1Q96CC6 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15□□□□□ -0.01
RHBDF1Q96CC6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
RHBDF1Q96CC6 RARRES2P5-201ENST00000564013 466 ntBASIC15□□□□□ -0.01
RHBDF1Q96CC6 RNA5-8SN1-201ENST00000610460 153 ntBASIC15□□□□□ -0.01
RHBDF1Q96CC6 RNA5-8SN5-202ENST00000612463 153 ntBASIC15□□□□□ -0.01
RHBDF1Q96CC6 RNA5-8SN4-201ENST00000613359 153 ntBASIC15□□□□□ -0.01
RHBDF1Q96CC6 RNA5-8SN5-201ENST00000619471 153 ntBASIC15□□□□□ -0.01
RHBDF1Q96CC6 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15□□□□□ -0.01
RHBDF1Q96CC6 AC067930.6-201ENST00000623257 4947 ntBASIC15□□□□□ -0.01
RHBDF1Q96CC6 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RHBDF1Q96CC6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15□□□□□ -0.01
RHBDF1Q96CC6 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15□□□□□ -0.01
RHBDF1Q96CC6 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RHBDF1Q96CC6 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RHBDF1Q96CC6 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDF1Q96CC6 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDF1Q96CC6 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDF1Q96CC6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDF1Q96CC6 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDF1Q96CC6 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDF1Q96CC6 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15□□□□□ -0.01
RHBDF1Q96CC6 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 CYMP-203ENST00000474680 1263 ntBASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 DOC2GP-202ENST00000514950 1163 ntBASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 AC023310.3-201ENST00000557027 670 ntBASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 AC100756.1-201ENST00000562736 682 ntBASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 AC138749.3-201ENST00000567691 622 ntBASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 SAMD11P1-201ENST00000571429 661 ntBASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 AC116165.1-201ENST00000611806 668 ntBASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDF1Q96CC6 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms