Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 WASH3P-207ENST00000560956 1394 ntBASIC15.1■□□□□ 0.01
ATL1Q8WXF7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATL1Q8WXF7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 AL158212.4-201ENST00000624062 1286 ntBASIC15.09■□□□□ 0.01
ATL1Q8WXF7 AC004840.1-201ENST00000636359 365 ntBASIC15.09■□□□□ 0.01
ATL1Q8WXF7 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.09■□□□□ 0.01
ATL1Q8WXF7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0.01
ATL1Q8WXF7 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
ATL1Q8WXF7 AC097376.2-205ENST00000610159 5334 ntBASIC15.08■□□□□ 0.01
ATL1Q8WXF7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
ATL1Q8WXF7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ATL1Q8WXF7 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
ATL1Q8WXF7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.08■□□□□ 0.01
ATL1Q8WXF7 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
ATL1Q8WXF7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
ATL1Q8WXF7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
ATL1Q8WXF7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.08■□□□□ 0
ATL1Q8WXF7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
ATL1Q8WXF7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.08■□□□□ 0
ATL1Q8WXF7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.08■□□□□ 0
ATL1Q8WXF7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.08■□□□□ 0
ATL1Q8WXF7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ATL1Q8WXF7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.08■□□□□ 0
ATL1Q8WXF7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
ATL1Q8WXF7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
ATL1Q8WXF7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.08■□□□□ 0
ATL1Q8WXF7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.08■□□□□ 0
ATL1Q8WXF7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.08■□□□□ 0
ATL1Q8WXF7 INGX-202ENST00000489074 768 ntBASIC15.08■□□□□ 0
ATL1Q8WXF7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.08■□□□□ 0
ATL1Q8WXF7 AC036164.1-201ENST00000570544 333 ntBASIC15.08■□□□□ 0
ATL1Q8WXF7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.08■□□□□ 0
ATL1Q8WXF7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.08■□□□□ 0
ATL1Q8WXF7 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
ATL1Q8WXF7 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.08■□□□□ 0
ATL1Q8WXF7 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ATL1Q8WXF7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.08■□□□□ 0
ATL1Q8WXF7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.08■□□□□ 0
ATL1Q8WXF7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.08■□□□□ 0
ATL1Q8WXF7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
ATL1Q8WXF7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.08■□□□□ 0
ATL1Q8WXF7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
ATL1Q8WXF7 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
ATL1Q8WXF7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.07■□□□□ 0
ATL1Q8WXF7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.07■□□□□ 0
ATL1Q8WXF7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ATL1Q8WXF7 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.07■□□□□ 0
ATL1Q8WXF7 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ATL1Q8WXF7 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
ATL1Q8WXF7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
ATL1Q8WXF7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ATL1Q8WXF7 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.07■□□□□ 0
ATL1Q8WXF7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ATL1Q8WXF7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ATL1Q8WXF7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
ATL1Q8WXF7 MROH4P-201ENST00000431302 1578 ntBASIC15.07■□□□□ 0
ATL1Q8WXF7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
ATL1Q8WXF7 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
ATL1Q8WXF7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.07■□□□□ 0
ATL1Q8WXF7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
ATL1Q8WXF7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
ATL1Q8WXF7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.07■□□□□ 0
ATL1Q8WXF7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ATL1Q8WXF7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms