Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.45■□□□□ 0.06
SLC44A1Q8WWI5 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 AL161772.1-201ENST00000610494 4412 ntBASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 LINC01230-201ENST00000625222 3017 ntBASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 AC136759.1-202ENST00000530858 2194 ntBASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 AL080243.2-201ENST00000418783 582 ntBASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 AC015922.1-201ENST00000421102 1152 ntBASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 BX842568.4-201ENST00000421222 227 ntBASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 LINC00628-201ENST00000628516 1289 ntBASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 AF228730.6-201ENST00000641497 218 ntBASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 AC084121.3-201ENST00000641716 218 ntBASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC44A1Q8WWI5 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC44A1Q8WWI5 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SLC44A1Q8WWI5 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC44A1Q8WWI5 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC44A1Q8WWI5 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC44A1Q8WWI5 AC005840.4-201ENST00000541242 2494 ntBASIC15.43■□□□□ 0.06
SLC44A1Q8WWI5 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SLC44A1Q8WWI5 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SLC44A1Q8WWI5 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.43■□□□□ 0.06
SLC44A1Q8WWI5 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SLC44A1Q8WWI5 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SLC44A1Q8WWI5 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC44A1Q8WWI5 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC44A1Q8WWI5 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC44A1Q8WWI5 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC44A1Q8WWI5 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.43■□□□□ 0.06
SLC44A1Q8WWI5 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.43■□□□□ 0.06
SLC44A1Q8WWI5 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SLC44A1Q8WWI5 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.43■□□□□ 0.06
SLC44A1Q8WWI5 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC44A1Q8WWI5 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC44A1Q8WWI5 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SLC44A1Q8WWI5 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC44A1Q8WWI5 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms