Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 AC234783.1-201ENST00000441761 496 ntBASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 AP001582.1-201ENST00000525856 295 ntBASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHROOM3Q8TF72 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 AC011270.2-201ENST00000624293 2550 ntBASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 MIR4259-201ENST00000584466 101 ntBASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 AC133539.2-201ENST00000604757 467 ntBASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 AJ011931.1-201ENST00000618749 2492 ntBASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHROOM3Q8TF72 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.62■□□□□ 0.09
SHROOM3Q8TF72 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHROOM3Q8TF72 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHROOM3Q8TF72 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SHROOM3Q8TF72 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.62■□□□□ 0.09
SHROOM3Q8TF72 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SHROOM3Q8TF72 AC022137.2-201ENST00000503482 481 ntBASIC15.62■□□□□ 0.09
SHROOM3Q8TF72 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.62■□□□□ 0.09
SHROOM3Q8TF72 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.62■□□□□ 0.09
SHROOM3Q8TF72 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.62■□□□□ 0.09
SHROOM3Q8TF72 CU634019.7-201ENST00000624153 1185 ntBASIC15.62■□□□□ 0.09
SHROOM3Q8TF72 FP236241.2-201ENST00000624906 1185 ntBASIC15.62■□□□□ 0.09
SHROOM3Q8TF72 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SHROOM3Q8TF72 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
SHROOM3Q8TF72 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SHROOM3Q8TF72 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHROOM3Q8TF72 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.62■□□□□ 0.09
SHROOM3Q8TF72 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHROOM3Q8TF72 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SHROOM3Q8TF72 LINC02228-204ENST00000642115 2962 ntBASIC15.62■□□□□ 0.09
SHROOM3Q8TF72 AC007787.1-201ENST00000588095 1583 ntBASIC15.62■□□□□ 0.09
SHROOM3Q8TF72 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.62■□□□□ 0.09
SHROOM3Q8TF72 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.62■□□□□ 0.09
SHROOM3Q8TF72 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.62■□□□□ 0.09
SHROOM3Q8TF72 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHROOM3Q8TF72 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms