Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 AL109954.1-202ENST00000564051 2148 ntBASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 AL442647.2-201ENST00000429864 857 ntBASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 HNRNPUP1-201ENST00000554987 333 ntBASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 AC010319.3-201ENST00000597028 470 ntBASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 AC133539.2-201ENST00000604757 467 ntBASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CLDND2Q8NHS1 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
CLDND2Q8NHS1 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
CLDND2Q8NHS1 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.31
CLDND2Q8NHS1 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
CLDND2Q8NHS1 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 GRK6P1-201ENST00000400595 1711 ntBASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 MIR1909-201ENST00000411312 80 ntBASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 TOMM22P5-201ENST00000416399 439 ntBASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 AC136604.1-201ENST00000418535 575 ntBASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 AL162726.2-201ENST00000438986 1017 ntBASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 AC015936.2-201ENST00000593177 259 ntBASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 AC008735.3-201ENST00000596646 500 ntBASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 AC136621.1-201ENST00000624017 2304 ntBASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDND2Q8NHS1 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms