Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.64□□□□□ -0.23
DNAAF1Q8NEP3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 AC041040.2-201ENST00000622926 2899 ntBASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.63□□□□□ -0.23
DNAAF1Q8NEP3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 TIMM8BP1-201ENST00000452384 211 ntBASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 PGAM5P1-201ENST00000518923 814 ntBASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 AP3S2-216ENST00000617003 1561 ntBASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
DNAAF1Q8NEP3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
DNAAF1Q8NEP3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
DNAAF1Q8NEP3 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms