Protein–RNA interactions for Protein: Q8N5V2

NGEF, Ephexin-1, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGEFQ8N5V2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC20.18■□□□□ 0.82
NGEFQ8N5V2 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 HLA-V-201ENST00000429037 534 ntBASIC20.18■□□□□ 0.82
NGEFQ8N5V2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 CU634019.7-201ENST00000624153 1185 ntBASIC20.18■□□□□ 0.82
NGEFQ8N5V2 FP236241.2-201ENST00000624906 1185 ntBASIC20.18■□□□□ 0.82
NGEFQ8N5V2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 KRT8P22-201ENST00000562317 1415 ntBASIC20.18■□□□□ 0.82
NGEFQ8N5V2 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NGEFQ8N5V2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 AC099063.4-201ENST00000641099 1602 ntBASIC20.17■□□□□ 0.82
NGEFQ8N5V2 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 AC234783.1-201ENST00000441761 496 ntBASIC20.17■□□□□ 0.82
NGEFQ8N5V2 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 PIGL-212ENST00000581006 554 ntTSL 4 BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.17■□□□□ 0.82
NGEFQ8N5V2 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NGEFQ8N5V2 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 AC124283.3-201ENST00000570869 594 ntBASIC20.16■□□□□ 0.82
NGEFQ8N5V2 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 ABBA01031660.1-201ENST00000635219 756 ntBASIC20.16■□□□□ 0.82
NGEFQ8N5V2 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 HNRNPA1P48-201ENST00000562726 1377 ntBASIC20.16■□□□□ 0.82
NGEFQ8N5V2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC20.16■□□□□ 0.82
NGEFQ8N5V2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms