Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LTBP4Q8N2S1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LTBP4Q8N2S1 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.5■□□□□ 0.87
LTBP4Q8N2S1 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LTBP4Q8N2S1 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
LTBP4Q8N2S1 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LTBP4Q8N2S1 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 MIR611-201ENST00000384869 67 ntBASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 RBPMSLP-201ENST00000433427 502 ntBASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 NRADDP-201ENST00000437305 691 ntBASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 B9D1-206ENST00000461069 923 ntTSL 2 BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 NAA40-205ENST00000539656 577 ntTSL 4 BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 AC018695.7-201ENST00000624587 2492 ntBASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 ZBED1P1-201ENST00000502364 1930 ntBASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 DERL2-206ENST00000572834 589 ntTSL 3 BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
LTBP4Q8N2S1 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LTBP4Q8N2S1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.48■□□□□ 0.87
LTBP4Q8N2S1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LTBP4Q8N2S1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.48■□□□□ 0.87
LTBP4Q8N2S1 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LTBP4Q8N2S1 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC20.48■□□□□ 0.87
LTBP4Q8N2S1 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
LTBP4Q8N2S1 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC20.48■□□□□ 0.87
LTBP4Q8N2S1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LTBP4Q8N2S1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
LTBP4Q8N2S1 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
LTBP4Q8N2S1 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LTBP4Q8N2S1 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC20.48■□□□□ 0.87
LTBP4Q8N2S1 CDK4P1-201ENST00000454213 828 ntBASIC20.48■□□□□ 0.87
LTBP4Q8N2S1 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC20.48■□□□□ 0.87
LTBP4Q8N2S1 AC095040.1-201ENST00000513286 675 ntBASIC20.48■□□□□ 0.87
LTBP4Q8N2S1 NT5C-204ENST00000578337 582 ntTSL 2 BASIC20.48■□□□□ 0.87
LTBP4Q8N2S1 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC20.48■□□□□ 0.87
LTBP4Q8N2S1 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC20.48■□□□□ 0.87
LTBP4Q8N2S1 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LTBP4Q8N2S1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
LTBP4Q8N2S1 AC004408.2-201ENST00000623613 2777 ntBASIC20.48■□□□□ 0.87
LTBP4Q8N2S1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LTBP4Q8N2S1 ALOX12P2-203ENST00000570921 1945 ntBASIC20.48■□□□□ 0.87
LTBP4Q8N2S1 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LTBP4Q8N2S1 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 AL050341.2-201ENST00000567508 1541 ntBASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 PTPA-215ENST00000432124 567 ntTSL 4 BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 POLR2LP1-206ENST00000444785 187 ntBASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 AC092910.2-201ENST00000491262 348 ntBASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 AC026412.1-206ENST00000502273 206 ntBASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 ALG1L7P-201ENST00000502317 768 ntBASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 AC087203.1-201ENST00000532111 1181 ntBASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 AC079414.2-201ENST00000567157 1104 ntBASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 AP006248.1-201ENST00000610471 67 ntBASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC20.47■□□□□ 0.87
LTBP4Q8N2S1 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms