Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 CICP12-201ENST00000455801 843 ntBASIC18.27■□□□□ 0.52
SLX4Q8IY92 FTH1P22-201ENST00000456305 520 ntBASIC18.27■□□□□ 0.52
SLX4Q8IY92 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLX4Q8IY92 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC18.27■□□□□ 0.52
SLX4Q8IY92 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLX4Q8IY92 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC18.27■□□□□ 0.52
SLX4Q8IY92 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.27■□□□□ 0.52
SLX4Q8IY92 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLX4Q8IY92 AC092299.1-201ENST00000632679 757 ntBASIC18.27■□□□□ 0.52
SLX4Q8IY92 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLX4Q8IY92 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLX4Q8IY92 CICP13-201ENST00000422015 2789 ntBASIC18.27■□□□□ 0.51
SLX4Q8IY92 AC010491.1-201ENST00000563101 2797 ntBASIC18.27■□□□□ 0.51
SLX4Q8IY92 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLX4Q8IY92 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.27■□□□□ 0.51
SLX4Q8IY92 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLX4Q8IY92 KRT18P9-201ENST00000604826 1300 ntBASIC18.27■□□□□ 0.51
SLX4Q8IY92 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLX4Q8IY92 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.26■□□□□ 0.51
SLX4Q8IY92 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC18.26■□□□□ 0.51
SLX4Q8IY92 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SLX4Q8IY92 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLX4Q8IY92 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.26■□□□□ 0.51
SLX4Q8IY92 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SLX4Q8IY92 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLX4Q8IY92 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLX4Q8IY92 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC18.26■□□□□ 0.51
SLX4Q8IY92 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC18.26■□□□□ 0.51
SLX4Q8IY92 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SLX4Q8IY92 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLX4Q8IY92 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLX4Q8IY92 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLX4Q8IY92 AC079328.2-201ENST00000561241 3354 ntBASIC18.26■□□□□ 0.51
SLX4Q8IY92 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.26■□□□□ 0.51
SLX4Q8IY92 LINC02199-201ENST00000506655 2702 ntBASIC18.26■□□□□ 0.51
SLX4Q8IY92 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.26■□□□□ 0.51
SLX4Q8IY92 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLX4Q8IY92 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.26■□□□□ 0.51
SLX4Q8IY92 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLX4Q8IY92 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC18.26■□□□□ 0.51
SLX4Q8IY92 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
SLX4Q8IY92 AP003680.1-201ENST00000598970 3660 ntBASIC18.26■□□□□ 0.51
SLX4Q8IY92 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLX4Q8IY92 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLX4Q8IY92 AC105250.1-201ENST00000509378 2057 ntBASIC18.26■□□□□ 0.51
SLX4Q8IY92 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLX4Q8IY92 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLX4Q8IY92 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SLX4Q8IY92 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.26■□□□□ 0.51
SLX4Q8IY92 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.26■□□□□ 0.51
SLX4Q8IY92 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.26■□□□□ 0.51
SLX4Q8IY92 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SLX4Q8IY92 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLX4Q8IY92 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC18.26■□□□□ 0.51
SLX4Q8IY92 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SLX4Q8IY92 CHCHD2P9-201ENST00000461726 456 ntBASIC18.26■□□□□ 0.51
SLX4Q8IY92 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLX4Q8IY92 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC18.26■□□□□ 0.51
SLX4Q8IY92 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC18.26■□□□□ 0.51
SLX4Q8IY92 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLX4Q8IY92 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC18.26■□□□□ 0.51
SLX4Q8IY92 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SLX4Q8IY92 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLX4Q8IY92 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLX4Q8IY92 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLX4Q8IY92 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.25■□□□□ 0.51
SLX4Q8IY92 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLX4Q8IY92 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.25■□□□□ 0.51
SLX4Q8IY92 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.25■□□□□ 0.51
SLX4Q8IY92 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLX4Q8IY92 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SLX4Q8IY92 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.25■□□□□ 0.51
SLX4Q8IY92 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLX4Q8IY92 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLX4Q8IY92 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLX4Q8IY92 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLX4Q8IY92 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLX4Q8IY92 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLX4Q8IY92 AL357563.1-201ENST00000404728 395 ntBASIC18.25■□□□□ 0.51
SLX4Q8IY92 TLE1P1-201ENST00000422965 589 ntBASIC18.25■□□□□ 0.51
SLX4Q8IY92 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SLX4Q8IY92 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC18.25■□□□□ 0.51
SLX4Q8IY92 RN7SL81P-201ENST00000493781 261 ntBASIC18.25■□□□□ 0.51
SLX4Q8IY92 MIR3188-201ENST00000583494 85 ntBASIC18.25■□□□□ 0.51
SLX4Q8IY92 AC133540.1-201ENST00000620845 1019 ntBASIC18.25■□□□□ 0.51
SLX4Q8IY92 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
SLX4Q8IY92 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.25■□□□□ 0.51
SLX4Q8IY92 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLX4Q8IY92 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLX4Q8IY92 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLX4Q8IY92 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.24■□□□□ 0.51
SLX4Q8IY92 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLX4Q8IY92 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLX4Q8IY92 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SLX4Q8IY92 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLX4Q8IY92 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC18.24■□□□□ 0.51
SLX4Q8IY92 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC18.24■□□□□ 0.51
SLX4Q8IY92 AL139008.1-201ENST00000437894 228 ntBASIC18.24■□□□□ 0.51
SLX4Q8IY92 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLX4Q8IY92 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms