Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 FAM8A3P-201ENST00000427218 844 ntBASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 AC097493.3-201ENST00000509725 367 ntBASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC83Q8IWF9 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 AC005912.2-201ENST00000619492 2400 ntBASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 AC087499.5-201ENST00000452760 1342 ntBASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 AC007191.1-201ENST00000623179 2995 ntBASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC83Q8IWF9 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC83Q8IWF9 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC83Q8IWF9 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CCDC83Q8IWF9 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC83Q8IWF9 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC83Q8IWF9 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC83Q8IWF9 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
CCDC83Q8IWF9 AC140479.7-201ENST00000636301 2332 ntBASIC18.1■□□□□ 0.49
CCDC83Q8IWF9 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC83Q8IWF9 AC100757.3-201ENST00000622361 1406 ntBASIC18.1■□□□□ 0.49
CCDC83Q8IWF9 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC83Q8IWF9 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CCDC83Q8IWF9 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC83Q8IWF9 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC83Q8IWF9 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC83Q8IWF9 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC83Q8IWF9 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC83Q8IWF9 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC83Q8IWF9 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC83Q8IWF9 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC83Q8IWF9 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC83Q8IWF9 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CCDC83Q8IWF9 AC015911.4-201ENST00000588022 1070 ntBASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms