Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 FAM45BP-202ENST00000592932 1624 ntBASIC10.3□□□□□ -0.76
SCXQ7RTU7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 AL589702.1-201ENST00000641229 1509 ntBASIC10.3□□□□□ -0.76
SCXQ7RTU7 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 GSN-203ENST00000373808 2664 ntTSL 2 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 SERBP1P3-201ENST00000459980 809 ntBASIC10.3□□□□□ -0.76
SCXQ7RTU7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 AC135586.1-201ENST00000539323 574 ntBASIC10.3□□□□□ -0.76
SCXQ7RTU7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 AC104794.3-201ENST00000566840 1248 ntBASIC10.3□□□□□ -0.76
SCXQ7RTU7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 AC026979.3-201ENST00000607315 403 ntBASIC10.3□□□□□ -0.76
SCXQ7RTU7 RNA5-8SN1-201ENST00000610460 153 ntBASIC10.3□□□□□ -0.76
SCXQ7RTU7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 RNA5-8SN5-202ENST00000612463 153 ntBASIC10.3□□□□□ -0.76
SCXQ7RTU7 RNA5-8SN4-201ENST00000613359 153 ntBASIC10.3□□□□□ -0.76
SCXQ7RTU7 RNA5-8SN5-201ENST00000619471 153 ntBASIC10.3□□□□□ -0.76
SCXQ7RTU7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 AL359258.3-201ENST00000622910 2331 ntBASIC10.3□□□□□ -0.76
SCXQ7RTU7 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 AC026748.1-201ENST00000624349 3251 ntBASIC10.3□□□□□ -0.76
SCXQ7RTU7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 GGT4P-201ENST00000623672 1708 ntBASIC10.3□□□□□ -0.76
SCXQ7RTU7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SCXQ7RTU7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC10.3□□□□□ -0.76
SCXQ7RTU7 AC007541.1-201ENST00000570282 1469 ntBASIC10.3□□□□□ -0.76
SCXQ7RTU7 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SCXQ7RTU7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC10.29□□□□□ -0.76
SCXQ7RTU7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC10.29□□□□□ -0.76
SCXQ7RTU7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC10.29□□□□□ -0.76
SCXQ7RTU7 CICP14-201ENST00000629111 2732 ntBASIC10.29□□□□□ -0.76
SCXQ7RTU7 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SCXQ7RTU7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC10.29□□□□□ -0.76
SCXQ7RTU7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC10.29□□□□□ -0.76
SCXQ7RTU7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SCXQ7RTU7 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SCXQ7RTU7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
SCXQ7RTU7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC10.29□□□□□ -0.76
SCXQ7RTU7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SCXQ7RTU7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
SCXQ7RTU7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SCXQ7RTU7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms