Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SHFQ7M4L6 AZGP1P1-201ENST00000411909 902 ntBASIC14□□□□□ -0.17
SHFQ7M4L6 MKNK2P1-201ENST00000437526 628 ntBASIC14□□□□□ -0.17
SHFQ7M4L6 NMU-202ENST00000505262 693 ntTSL 3 BASIC14□□□□□ -0.17
SHFQ7M4L6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14□□□□□ -0.17
SHFQ7M4L6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14□□□□□ -0.17
SHFQ7M4L6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 AC055717.3-201ENST00000622967 595 ntBASIC14□□□□□ -0.17
SHFQ7M4L6 AC084121.4-201ENST00000641598 221 ntBASIC14□□□□□ -0.17
SHFQ7M4L6 AF228730.8-201ENST00000642140 221 ntBASIC14□□□□□ -0.17
SHFQ7M4L6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SHFQ7M4L6 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14□□□□□ -0.17
SHFQ7M4L6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14□□□□□ -0.17
SHFQ7M4L6 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14□□□□□ -0.17
SHFQ7M4L6 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 PCDHGB8P-201ENST00000502926 1973 ntBASIC14□□□□□ -0.17
SHFQ7M4L6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
SHFQ7M4L6 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.99□□□□□ -0.17
SHFQ7M4L6 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
SHFQ7M4L6 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.99□□□□□ -0.17
SHFQ7M4L6 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SHFQ7M4L6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.99□□□□□ -0.17
SHFQ7M4L6 AL592309.1-201ENST00000443127 649 ntBASIC13.99□□□□□ -0.17
SHFQ7M4L6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 MTDHP5-201ENST00000598980 586 ntBASIC13.99□□□□□ -0.17
SHFQ7M4L6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.99□□□□□ -0.17
SHFQ7M4L6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SHFQ7M4L6 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
SHFQ7M4L6 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.99□□□□□ -0.17
SHFQ7M4L6 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.99□□□□□ -0.17
SHFQ7M4L6 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.99□□□□□ -0.17
SHFQ7M4L6 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SHFQ7M4L6 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 AL137784.3-201ENST00000623858 2288 ntBASIC13.99□□□□□ -0.17
SHFQ7M4L6 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.99□□□□□ -0.17
SHFQ7M4L6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.99□□□□□ -0.17
SHFQ7M4L6 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SHFQ7M4L6 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
SHFQ7M4L6 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SHFQ7M4L6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHFQ7M4L6 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHFQ7M4L6 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHFQ7M4L6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHFQ7M4L6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHFQ7M4L6 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHFQ7M4L6 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHFQ7M4L6 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SHFQ7M4L6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHFQ7M4L6 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHFQ7M4L6 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHFQ7M4L6 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHFQ7M4L6 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SHFQ7M4L6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.98□□□□□ -0.17
SHFQ7M4L6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms