Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF549Q6P9A3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF549Q6P9A3 REXO1L4P-201ENST00000605109 1937 ntBASIC15.31■□□□□ 0.04
ZNF549Q6P9A3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 PCDHA3-202ENST00000532566 4594 ntBASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 RFPL4AP1-201ENST00000530883 850 ntBASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 AC011467.4-201ENST00000594891 528 ntBASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 FGD5P1-202ENST00000614866 2498 ntBASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF549Q6P9A3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 AC104794.3-201ENST00000566840 1248 ntBASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF549Q6P9A3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF549Q6P9A3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF549Q6P9A3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF549Q6P9A3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF549Q6P9A3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF549Q6P9A3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms