Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATL3Q6DD88 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATL3Q6DD88 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.55■□□□□ 0.4
ATL3Q6DD88 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATL3Q6DD88 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.55■□□□□ 0.4
ATL3Q6DD88 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.55■□□□□ 0.4
ATL3Q6DD88 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ATL3Q6DD88 AC114501.2-201ENST00000439631 535 ntBASIC17.55■□□□□ 0.4
ATL3Q6DD88 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.55■□□□□ 0.4
ATL3Q6DD88 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATL3Q6DD88 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.55■□□□□ 0.4
ATL3Q6DD88 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.55■□□□□ 0.4
ATL3Q6DD88 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.55■□□□□ 0.4
ATL3Q6DD88 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.55■□□□□ 0.4
ATL3Q6DD88 AC025678.2-201ENST00000562061 970 ntBASIC17.55■□□□□ 0.4
ATL3Q6DD88 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.55■□□□□ 0.4
ATL3Q6DD88 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.55■□□□□ 0.4
ATL3Q6DD88 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.55■□□□□ 0.4
ATL3Q6DD88 AL844908.2-201ENST00000609461 460 ntBASIC17.55■□□□□ 0.4
ATL3Q6DD88 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.55■□□□□ 0.4
ATL3Q6DD88 Z92544.3-201ENST00000624747 417 ntBASIC17.55■□□□□ 0.4
ATL3Q6DD88 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.55■□□□□ 0.4
ATL3Q6DD88 AC134684.3-201ENST00000641758 218 ntBASIC17.55■□□□□ 0.4
ATL3Q6DD88 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.55■□□□□ 0.4
ATL3Q6DD88 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATL3Q6DD88 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ATL3Q6DD88 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.55■□□□□ 0.4
ATL3Q6DD88 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ATL3Q6DD88 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATL3Q6DD88 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATL3Q6DD88 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATL3Q6DD88 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ATL3Q6DD88 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATL3Q6DD88 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATL3Q6DD88 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.54■□□□□ 0.4
ATL3Q6DD88 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATL3Q6DD88 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.54■□□□□ 0.4
ATL3Q6DD88 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATL3Q6DD88 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATL3Q6DD88 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATL3Q6DD88 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ATL3Q6DD88 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATL3Q6DD88 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.54■□□□□ 0.4
ATL3Q6DD88 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ATL3Q6DD88 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
ATL3Q6DD88 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATL3Q6DD88 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATL3Q6DD88 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATL3Q6DD88 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATL3Q6DD88 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.54■□□□□ 0.4
ATL3Q6DD88 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ATL3Q6DD88 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATL3Q6DD88 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ATL3Q6DD88 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATL3Q6DD88 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.54■□□□□ 0.4
ATL3Q6DD88 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
ATL3Q6DD88 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATL3Q6DD88 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.54■□□□□ 0.4
ATL3Q6DD88 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATL3Q6DD88 KLF2P3-201ENST00000451977 1087 ntBASIC17.54■□□□□ 0.4
ATL3Q6DD88 AC027369.6-201ENST00000525520 931 ntBASIC17.54■□□□□ 0.4
ATL3Q6DD88 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ATL3Q6DD88 AC044860.1-202ENST00000559481 777 ntBASIC17.54■□□□□ 0.4
ATL3Q6DD88 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.54■□□□□ 0.4
ATL3Q6DD88 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATL3Q6DD88 SNX18-202ENST00000343017 3140 ntBASIC17.54■□□□□ 0.4
ATL3Q6DD88 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATL3Q6DD88 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ATL3Q6DD88 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ATL3Q6DD88 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.54■□□□□ 0.4
ATL3Q6DD88 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATL3Q6DD88 AC007686.3-201ENST00000619017 3487 ntBASIC17.54■□□□□ 0.4
ATL3Q6DD88 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATL3Q6DD88 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATL3Q6DD88 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATL3Q6DD88 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ATL3Q6DD88 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATL3Q6DD88 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATL3Q6DD88 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ATL3Q6DD88 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATL3Q6DD88 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATL3Q6DD88 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATL3Q6DD88 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATL3Q6DD88 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATL3Q6DD88 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
ATL3Q6DD88 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATL3Q6DD88 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATL3Q6DD88 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATL3Q6DD88 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.53■□□□□ 0.4
ATL3Q6DD88 BTBD7P1-201ENST00000447253 1453 ntBASIC17.53■□□□□ 0.4
ATL3Q6DD88 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
ATL3Q6DD88 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATL3Q6DD88 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.53■□□□□ 0.4
ATL3Q6DD88 AL645937.2-201ENST00000396808 931 ntBASIC17.53■□□□□ 0.4
ATL3Q6DD88 TSEN15P1-201ENST00000423257 515 ntBASIC17.53■□□□□ 0.4
ATL3Q6DD88 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.53■□□□□ 0.4
ATL3Q6DD88 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.53■□□□□ 0.4
ATL3Q6DD88 AC004967.1-201ENST00000453589 447 ntBASIC17.53■□□□□ 0.4
ATL3Q6DD88 AC125807.1-201ENST00000483097 614 ntBASIC17.53■□□□□ 0.4
ATL3Q6DD88 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms