Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 RN7SL837P-201ENST00000463010 287 ntBASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 AC025181.2-201ENST00000606994 802 ntBASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 AC133552.6-201ENST00000613406 534 ntBASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HERC4Q5GLZ8 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 SPDYE19P-201ENST00000338590 713 ntBASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 AC234783.1-201ENST00000441761 496 ntBASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 MIR4538-201ENST00000581377 78 ntBASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HERC4Q5GLZ8 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HERC4Q5GLZ8 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HERC4Q5GLZ8 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
HERC4Q5GLZ8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
HERC4Q5GLZ8 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.21■□□□□ 0.35
HERC4Q5GLZ8 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HERC4Q5GLZ8 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.21■□□□□ 0.35
HERC4Q5GLZ8 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HERC4Q5GLZ8 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HERC4Q5GLZ8 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HERC4Q5GLZ8 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HERC4Q5GLZ8 CLK3P2-201ENST00000427566 1453 ntBASIC17.21■□□□□ 0.35
HERC4Q5GLZ8 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HERC4Q5GLZ8 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
HERC4Q5GLZ8 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HERC4Q5GLZ8 BCYRN1-201ENST00000418539 200 ntBASIC17.21■□□□□ 0.35
HERC4Q5GLZ8 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.21■□□□□ 0.35
HERC4Q5GLZ8 TPRX2P-201ENST00000535362 881 ntBASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms