Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 KRT8P22-201ENST00000562317 1415 ntBASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.18■□□□□ 0.18
PTPN20Q4JDL3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 AL158070.2-201ENST00000623713 1621 ntBASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 CRB3P1-201ENST00000449338 276 ntBASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 TP53TG3HP-202ENST00000569755 579 ntBASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 SPDYE22P-201ENST00000582158 798 ntBASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 AC092364.2-202ENST00000597012 1073 ntBASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 AL360270.3-201ENST00000609118 1348 ntBASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PTPN20Q4JDL3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 LINC02228-204ENST00000642115 2962 ntBASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 WFDC1-204ENST00000613603 549 ntBASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN20Q4JDL3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN20Q4JDL3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms