Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CDK5Q00535 OR2I1P-210ENST00000642037 4691 ntBASIC13.91□□□□□ -0.18
CDK5Q00535 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.91□□□□□ -0.18
CDK5Q00535 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.91□□□□□ -0.18
CDK5Q00535 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDK5Q00535 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
CDK5Q00535 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.9□□□□□ -0.18
CDK5Q00535 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.9□□□□□ -0.18
CDK5Q00535 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.9□□□□□ -0.18
CDK5Q00535 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
CDK5Q00535 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
CDK5Q00535 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CDK5Q00535 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CDK5Q00535 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CDK5Q00535 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.9□□□□□ -0.18
CDK5Q00535 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.9□□□□□ -0.18
CDK5Q00535 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 AC004832.2-201ENST00000426397 482 ntBASIC13.9□□□□□ -0.18
CDK5Q00535 AC005237.2-201ENST00000434368 219 ntBASIC13.9□□□□□ -0.18
CDK5Q00535 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.9□□□□□ -0.18
CDK5Q00535 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.9□□□□□ -0.18
CDK5Q00535 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CDK5Q00535 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CDK5Q00535 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
CDK5Q00535 AC120114.3-201ENST00000611923 658 ntBASIC13.9□□□□□ -0.18
CDK5Q00535 MIR6069-201ENST00000620069 79 ntBASIC13.9□□□□□ -0.18
CDK5Q00535 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CDK5Q00535 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CDK5Q00535 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
CDK5Q00535 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.9□□□□□ -0.18
CDK5Q00535 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CDK5Q00535 AC152010.1-201ENST00000415779 2006 ntBASIC13.9□□□□□ -0.18
CDK5Q00535 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 BEND3P1-201ENST00000421591 1944 ntBASIC13.9□□□□□ -0.18
CDK5Q00535 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDK5Q00535 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
CDK5Q00535 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CDK5Q00535 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
CDK5Q00535 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CDK5Q00535 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CDK5Q00535 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CDK5Q00535 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CDK5Q00535 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.89□□□□□ -0.19
CDK5Q00535 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.89□□□□□ -0.19
CDK5Q00535 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.89□□□□□ -0.19
CDK5Q00535 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
CDK5Q00535 LILRP1-201ENST00000444199 1370 ntBASIC13.89□□□□□ -0.19
CDK5Q00535 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.89□□□□□ -0.19
CDK5Q00535 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CDK5Q00535 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDK5Q00535 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CDK5Q00535 KRT18P32-201ENST00000424695 1287 ntBASIC13.89□□□□□ -0.19
CDK5Q00535 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms