Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ASIC1P78348 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ASIC1P78348 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ASIC1P78348 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ASIC1P78348 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.21■□□□□ 0.35
ASIC1P78348 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
ASIC1P78348 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ASIC1P78348 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ASIC1P78348 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.21■□□□□ 0.35
ASIC1P78348 CLK3P2-201ENST00000427566 1453 ntBASIC17.21■□□□□ 0.35
ASIC1P78348 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ASIC1P78348 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ASIC1P78348 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ASIC1P78348 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.21■□□□□ 0.35
ASIC1P78348 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ASIC1P78348 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.21■□□□□ 0.35
ASIC1P78348 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.21■□□□□ 0.35
ASIC1P78348 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.21■□□□□ 0.35
ASIC1P78348 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.21■□□□□ 0.35
ASIC1P78348 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ASIC1P78348 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.21■□□□□ 0.35
ASIC1P78348 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ASIC1P78348 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ASIC1P78348 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.21■□□□□ 0.35
ASIC1P78348 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ASIC1P78348 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ASIC1P78348 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ASIC1P78348 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ASIC1P78348 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.21■□□□□ 0.35
ASIC1P78348 AP000845.1-201ENST00000581677 2131 ntBASIC17.21■□□□□ 0.35
ASIC1P78348 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ASIC1P78348 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ASIC1P78348 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ASIC1P78348 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ASIC1P78348 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.21■□□□□ 0.34
ASIC1P78348 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
ASIC1P78348 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.34
ASIC1P78348 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ASIC1P78348 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
ASIC1P78348 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ASIC1P78348 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.21■□□□□ 0.34
ASIC1P78348 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ASIC1P78348 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ASIC1P78348 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ASIC1P78348 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ASIC1P78348 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.2■□□□□ 0.34
ASIC1P78348 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ASIC1P78348 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.2■□□□□ 0.34
ASIC1P78348 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.2■□□□□ 0.34
ASIC1P78348 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ASIC1P78348 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ASIC1P78348 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ASIC1P78348 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
ASIC1P78348 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ASIC1P78348 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ASIC1P78348 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.2■□□□□ 0.34
ASIC1P78348 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.2■□□□□ 0.34
ASIC1P78348 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ASIC1P78348 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ASIC1P78348 AL391069.4-201ENST00000609583 481 ntBASIC17.2■□□□□ 0.34
ASIC1P78348 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.2■□□□□ 0.34
ASIC1P78348 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ASIC1P78348 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ASIC1P78348 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ASIC1P78348 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ASIC1P78348 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ASIC1P78348 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ASIC1P78348 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.2■□□□□ 0.34
ASIC1P78348 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
ASIC1P78348 AL359258.3-201ENST00000622910 2331 ntBASIC17.2■□□□□ 0.34
ASIC1P78348 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.2■□□□□ 0.34
ASIC1P78348 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ASIC1P78348 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
ASIC1P78348 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ASIC1P78348 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ASIC1P78348 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ASIC1P78348 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.2■□□□□ 0.34
ASIC1P78348 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ASIC1P78348 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ASIC1P78348 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ASIC1P78348 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ASIC1P78348 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.19■□□□□ 0.34
ASIC1P78348 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ASIC1P78348 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ASIC1P78348 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ASIC1P78348 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
ASIC1P78348 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ASIC1P78348 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.19■□□□□ 0.34
ASIC1P78348 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ASIC1P78348 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ASIC1P78348 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.19■□□□□ 0.34
ASIC1P78348 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ASIC1P78348 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.19■□□□□ 0.34
ASIC1P78348 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.19■□□□□ 0.34
ASIC1P78348 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.19■□□□□ 0.34
ASIC1P78348 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
ASIC1P78348 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ASIC1P78348 AC011467.4-201ENST00000594891 528 ntBASIC17.19■□□□□ 0.34
ASIC1P78348 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.19■□□□□ 0.34
ASIC1P78348 AL645728.2-202ENST00000641679 227 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms