Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC004790.1-201ENST00000612686 536 ntBASIC11.46□□□□□ -0.57
CMC4P56277 WFDC1-204ENST00000613603 549 ntBASIC11.46□□□□□ -0.57
CMC4P56277 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CMC4P56277 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC11.46□□□□□ -0.57
CMC4P56277 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
CMC4P56277 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CMC4P56277 ABBA01031660.1-201ENST00000635219 756 ntBASIC11.46□□□□□ -0.57
CMC4P56277 AC105233.6-201ENST00000642093 218 ntBASIC11.46□□□□□ -0.57
CMC4P56277 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC11.46□□□□□ -0.57
CMC4P56277 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CMC4P56277 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC11.46□□□□□ -0.58
CMC4P56277 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC11.46□□□□□ -0.58
CMC4P56277 PEG13-201ENST00000631594 5667 ntBASIC11.46□□□□□ -0.58
CMC4P56277 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CMC4P56277 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CMC4P56277 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC11.46□□□□□ -0.58
CMC4P56277 STK33-217ENST00000534493 1895 ntTSL 2 BASIC11.46□□□□□ -0.58
CMC4P56277 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CMC4P56277 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
CMC4P56277 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC11.46□□□□□ -0.58
CMC4P56277 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC11.46□□□□□ -0.58
CMC4P56277 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CMC4P56277 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CMC4P56277 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC11.46□□□□□ -0.58
CMC4P56277 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CMC4P56277 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC11.46□□□□□ -0.58
CMC4P56277 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CMC4P56277 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CMC4P56277 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
CMC4P56277 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CMC4P56277 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC11.45□□□□□ -0.58
CMC4P56277 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
CMC4P56277 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC11.45□□□□□ -0.58
CMC4P56277 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC11.45□□□□□ -0.58
CMC4P56277 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC11.45□□□□□ -0.58
CMC4P56277 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
CMC4P56277 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC11.45□□□□□ -0.58
CMC4P56277 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 GRAP-202ENST00000395635 834 ntTSL 2 BASIC11.45□□□□□ -0.58
CMC4P56277 NME2P1-201ENST00000426182 414 ntBASIC11.45□□□□□ -0.58
CMC4P56277 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.45□□□□□ -0.58
CMC4P56277 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 GALT-202ENST00000450095 1280 ntTSL 2 BASIC11.45□□□□□ -0.58
CMC4P56277 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC11.45□□□□□ -0.58
CMC4P56277 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC11.45□□□□□ -0.58
CMC4P56277 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC11.45□□□□□ -0.58
CMC4P56277 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
CMC4P56277 AP001582.1-201ENST00000525856 295 ntBASIC11.45□□□□□ -0.58
CMC4P56277 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
CMC4P56277 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC11.45□□□□□ -0.58
CMC4P56277 AC005225.4-201ENST00000557330 545 ntBASIC11.45□□□□□ -0.58
CMC4P56277 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 PAM16-204ENST00000571941 674 ntTSL 3 BASIC11.45□□□□□ -0.58
CMC4P56277 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC11.45□□□□□ -0.58
CMC4P56277 LINC02084-201ENST00000606069 1096 ntBASIC11.45□□□□□ -0.58
CMC4P56277 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC11.45□□□□□ -0.58
CMC4P56277 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC11.45□□□□□ -0.58
CMC4P56277 PRSS30P-206ENST00000641773 873 ntBASIC11.45□□□□□ -0.58
CMC4P56277 AC148477.4-201ENST00000613430 1793 ntBASIC11.45□□□□□ -0.58
CMC4P56277 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
CMC4P56277 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CMC4P56277 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
CMC4P56277 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
CMC4P56277 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
CMC4P56277 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC11.45□□□□□ -0.58
CMC4P56277 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CMC4P56277 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC11.45□□□□□ -0.58
CMC4P56277 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 AC007787.1-201ENST00000588095 1583 ntBASIC11.45□□□□□ -0.58
CMC4P56277 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CMC4P56277 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC11.44□□□□□ -0.58
CMC4P56277 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms