Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AP000845.1-201ENST00000581677 2131 ntBASIC16.05■□□□□ 0.16
CDH6P55285 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.05■□□□□ 0.16
CDH6P55285 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.05■□□□□ 0.16
CDH6P55285 AL645728.2-202ENST00000641679 227 ntBASIC16.05■□□□□ 0.16
CDH6P55285 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.05■□□□□ 0.16
CDH6P55285 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
CDH6P55285 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CDH6P55285 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDH6P55285 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH6P55285 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH6P55285 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.05■□□□□ 0.16
CDH6P55285 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH6P55285 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDH6P55285 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH6P55285 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDH6P55285 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
CDH6P55285 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH6P55285 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDH6P55285 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.04■□□□□ 0.16
CDH6P55285 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH6P55285 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH6P55285 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
CDH6P55285 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CDH6P55285 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CDH6P55285 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH6P55285 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CDH6P55285 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.04■□□□□ 0.16
CDH6P55285 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
CDH6P55285 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH6P55285 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH6P55285 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.04■□□□□ 0.16
CDH6P55285 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.04■□□□□ 0.16
CDH6P55285 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDH6P55285 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CDH6P55285 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.04■□□□□ 0.16
CDH6P55285 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CDH6P55285 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDH6P55285 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
CDH6P55285 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDH6P55285 CLK3P2-201ENST00000427566 1453 ntBASIC16.03■□□□□ 0.16
CDH6P55285 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH6P55285 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH6P55285 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH6P55285 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH6P55285 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH6P55285 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH6P55285 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH6P55285 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CDH6P55285 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CDH6P55285 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.03■□□□□ 0.16
CDH6P55285 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH6P55285 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH6P55285 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH6P55285 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.03■□□□□ 0.16
CDH6P55285 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH6P55285 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH6P55285 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH6P55285 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CDH6P55285 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.03■□□□□ 0.16
CDH6P55285 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH6P55285 INGX-202ENST00000489074 768 ntBASIC16.03■□□□□ 0.16
CDH6P55285 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.03■□□□□ 0.16
CDH6P55285 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH6P55285 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH6P55285 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH6P55285 AL391069.4-201ENST00000609583 481 ntBASIC16.03■□□□□ 0.16
CDH6P55285 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.03■□□□□ 0.16
CDH6P55285 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.03■□□□□ 0.16
CDH6P55285 AC004790.1-201ENST00000612686 536 ntBASIC16.03■□□□□ 0.16
CDH6P55285 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.03■□□□□ 0.16
CDH6P55285 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.03■□□□□ 0.16
CDH6P55285 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.03■□□□□ 0.16
CDH6P55285 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms