Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.71□□□□□ -0.05
NR1H2P55055 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 INTS4P1-203ENST00000641008 3683 ntBASIC14.71□□□□□ -0.05
NR1H2P55055 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.05
NR1H2P55055 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.71□□□□□ -0.05
NR1H2P55055 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.71□□□□□ -0.05
NR1H2P55055 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.71□□□□□ -0.05
NR1H2P55055 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 AC140658.5-201ENST00000438532 169 ntBASIC14.71□□□□□ -0.05
NR1H2P55055 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.71□□□□□ -0.05
NR1H2P55055 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.71□□□□□ -0.05
NR1H2P55055 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.71□□□□□ -0.05
NR1H2P55055 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
NR1H2P55055 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.71□□□□□ -0.05
NR1H2P55055 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.71□□□□□ -0.05
NR1H2P55055 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.71□□□□□ -0.05
NR1H2P55055 AC105339.1-204ENST00000636249 355 ntBASIC14.71□□□□□ -0.05
NR1H2P55055 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.71□□□□□ -0.05
NR1H2P55055 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NR1H2P55055 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.71□□□□□ -0.06
NR1H2P55055 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.71□□□□□ -0.06
NR1H2P55055 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
NR1H2P55055 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.71□□□□□ -0.06
NR1H2P55055 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
NR1H2P55055 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NR1H2P55055 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.7□□□□□ -0.06
NR1H2P55055 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H2P55055 AL353732.1-201ENST00000569618 1459 ntBASIC14.7□□□□□ -0.06
NR1H2P55055 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H2P55055 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
NR1H2P55055 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
NR1H2P55055 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.7□□□□□ -0.06
NR1H2P55055 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H2P55055 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H2P55055 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
NR1H2P55055 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NR1H2P55055 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H2P55055 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H2P55055 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H2P55055 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.7□□□□□ -0.06
NR1H2P55055 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.7□□□□□ -0.06
NR1H2P55055 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.7□□□□□ -0.06
NR1H2P55055 RN7SL589P-201ENST00000481268 310 ntBASIC14.7□□□□□ -0.06
NR1H2P55055 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
NR1H2P55055 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
NR1H2P55055 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
NR1H2P55055 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.7□□□□□ -0.06
NR1H2P55055 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H2P55055 MIR4515-201ENST00000584082 81 ntBASIC14.7□□□□□ -0.06
NR1H2P55055 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.7□□□□□ -0.06
NR1H2P55055 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H2P55055 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.7□□□□□ -0.06
NR1H2P55055 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H2P55055 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
NR1H2P55055 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H2P55055 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
NR1H2P55055 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H2P55055 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.7□□□□□ -0.06
NR1H2P55055 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H2P55055 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
NR1H2P55055 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H2P55055 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NR1H2P55055 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H2P55055 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
NR1H2P55055 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H2P55055 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
NR1H2P55055 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H2P55055 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
NR1H2P55055 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H2P55055 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NR1H2P55055 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.7□□□□□ -0.06
NR1H2P55055 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
NR1H2P55055 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.7□□□□□ -0.06
NR1H2P55055 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H2P55055 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H2P55055 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NR1H2P55055 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms