Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC106881.1-201ENST00000605849 3329 ntBASIC14.82□□□□□ -0.04
SLC6A12P48065 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A12P48065 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A12P48065 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A12P48065 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A12P48065 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A12P48065 AC098850.1-201ENST00000419919 790 ntBASIC14.82□□□□□ -0.04
SLC6A12P48065 AC134915.1-201ENST00000426461 574 ntBASIC14.82□□□□□ -0.04
SLC6A12P48065 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC6A12P48065 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.82□□□□□ -0.04
SLC6A12P48065 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.82□□□□□ -0.04
SLC6A12P48065 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A12P48065 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.82□□□□□ -0.04
SLC6A12P48065 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.82□□□□□ -0.04
SLC6A12P48065 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.82□□□□□ -0.04
SLC6A12P48065 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.82□□□□□ -0.04
SLC6A12P48065 AL132655.2-201ENST00000596276 594 ntBASIC14.82□□□□□ -0.04
SLC6A12P48065 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.82□□□□□ -0.04
SLC6A12P48065 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC6A12P48065 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A12P48065 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.82□□□□□ -0.04
SLC6A12P48065 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A12P48065 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A12P48065 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SLC6A12P48065 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
SLC6A12P48065 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A12P48065 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A12P48065 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SLC6A12P48065 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A12P48065 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A12P48065 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC6A12P48065 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SLC6A12P48065 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A12P48065 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
SLC6A12P48065 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SLC6A12P48065 NFIC-211ENST00000641145 8399 ntBASIC14.82□□□□□ -0.04
SLC6A12P48065 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
SLC6A12P48065 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A12P48065 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC6A12P48065 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.81□□□□□ -0.04
SLC6A12P48065 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.81□□□□□ -0.04
SLC6A12P48065 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC6A12P48065 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC6A12P48065 AC104596.2-201ENST00000512793 793 ntBASIC14.81□□□□□ -0.04
SLC6A12P48065 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 AC092552.1-201ENST00000547243 906 ntBASIC14.81□□□□□ -0.04
SLC6A12P48065 AC123567.1-201ENST00000548294 1261 ntBASIC14.81□□□□□ -0.04
SLC6A12P48065 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.81□□□□□ -0.04
SLC6A12P48065 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.81□□□□□ -0.04
SLC6A12P48065 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SLC6A12P48065 AC007431.3-201ENST00000623221 587 ntBASIC14.81□□□□□ -0.04
SLC6A12P48065 PRSS30P-206ENST00000641773 873 ntBASIC14.81□□□□□ -0.04
SLC6A12P48065 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC6A12P48065 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC6A12P48065 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SLC6A12P48065 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
SLC6A12P48065 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.81□□□□□ -0.04
SLC6A12P48065 CICP14-201ENST00000629111 2732 ntBASIC14.81□□□□□ -0.04
SLC6A12P48065 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SLC6A12P48065 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A12P48065 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SLC6A12P48065 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.81□□□□□ -0.04
SLC6A12P48065 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A12P48065 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SLC6A12P48065 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A12P48065 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A12P48065 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SLC6A12P48065 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A12P48065 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A12P48065 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SLC6A12P48065 REXO1L5P-201ENST00000622260 2098 ntBASIC14.8□□□□□ -0.04
SLC6A12P48065 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC6A12P48065 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms