Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SLC1A3P43003 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.22□□□□□ -0.13
SLC1A3P43003 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SLC1A3P43003 TSSK5P-201ENST00000423978 907 ntBASIC14.22□□□□□ -0.13
SLC1A3P43003 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SLC1A3P43003 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.22□□□□□ -0.13
SLC1A3P43003 AC009477.1-201ENST00000452936 217 ntBASIC14.22□□□□□ -0.13
SLC1A3P43003 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.22□□□□□ -0.13
SLC1A3P43003 TIMM17BP1-201ENST00000545713 516 ntBASIC14.22□□□□□ -0.13
SLC1A3P43003 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.22□□□□□ -0.13
SLC1A3P43003 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.22□□□□□ -0.13
SLC1A3P43003 AC015910.1-201ENST00000579400 975 ntBASIC14.22□□□□□ -0.13
SLC1A3P43003 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SLC1A3P43003 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.22□□□□□ -0.13
SLC1A3P43003 AC106028.4-201ENST00000614509 607 ntBASIC14.22□□□□□ -0.13
SLC1A3P43003 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.22□□□□□ -0.13
SLC1A3P43003 AC093512.1-201ENST00000617969 520 ntBASIC14.22□□□□□ -0.13
SLC1A3P43003 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC1A3P43003 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SLC1A3P43003 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.22□□□□□ -0.13
SLC1A3P43003 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC1A3P43003 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.22□□□□□ -0.13
SLC1A3P43003 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.22□□□□□ -0.13
SLC1A3P43003 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.21□□□□□ -0.13
SLC1A3P43003 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A3P43003 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A3P43003 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC1A3P43003 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A3P43003 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A3P43003 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SLC1A3P43003 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.21□□□□□ -0.13
SLC1A3P43003 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.21□□□□□ -0.13
SLC1A3P43003 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
SLC1A3P43003 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A3P43003 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A3P43003 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.21□□□□□ -0.13
SLC1A3P43003 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A3P43003 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC1A3P43003 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC1A3P43003 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC1A3P43003 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC1A3P43003 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A3P43003 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.21□□□□□ -0.13
SLC1A3P43003 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A3P43003 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A3P43003 AC138969.3-201ENST00000546612 1459 ntBASIC14.21□□□□□ -0.13
SLC1A3P43003 AC138932.2-201ENST00000548268 1459 ntBASIC14.21□□□□□ -0.13
SLC1A3P43003 AC126755.4-201ENST00000549796 1459 ntBASIC14.21□□□□□ -0.13
SLC1A3P43003 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A3P43003 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A3P43003 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SLC1A3P43003 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A3P43003 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A3P43003 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.21□□□□□ -0.13
SLC1A3P43003 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
SLC1A3P43003 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.21□□□□□ -0.13
SLC1A3P43003 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC1A3P43003 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.21□□□□□ -0.13
SLC1A3P43003 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SLC1A3P43003 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SLC1A3P43003 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A3P43003 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A3P43003 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SLC1A3P43003 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC1A3P43003 AL390754.1-201ENST00000619088 582 ntBASIC14.21□□□□□ -0.13
SLC1A3P43003 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.21□□□□□ -0.13
SLC1A3P43003 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
SLC1A3P43003 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.21□□□□□ -0.13
SLC1A3P43003 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.21□□□□□ -0.13
SLC1A3P43003 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A3P43003 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A3P43003 AC023024.2-201ENST00000623561 1993 ntBASIC14.21□□□□□ -0.13
SLC1A3P43003 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A3P43003 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A3P43003 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A3P43003 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SLC1A3P43003 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.21□□□□□ -0.14
SLC1A3P43003 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC1A3P43003 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.21□□□□□ -0.14
SLC1A3P43003 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.21□□□□□ -0.14
SLC1A3P43003 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.21□□□□□ -0.14
SLC1A3P43003 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC1A3P43003 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms