Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
KRT20P35900 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KRT20P35900 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.74□□□□□ -0.05
KRT20P35900 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
KRT20P35900 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KRT20P35900 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.74□□□□□ -0.05
KRT20P35900 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
KRT20P35900 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
KRT20P35900 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.74□□□□□ -0.05
KRT20P35900 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
KRT20P35900 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KRT20P35900 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
KRT20P35900 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
KRT20P35900 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.74□□□□□ -0.05
KRT20P35900 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
KRT20P35900 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.74□□□□□ -0.05
KRT20P35900 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KRT20P35900 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KRT20P35900 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KRT20P35900 CICP4-201ENST00000447359 2812 ntBASIC14.74□□□□□ -0.05
KRT20P35900 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.74□□□□□ -0.05
KRT20P35900 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KRT20P35900 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.74□□□□□ -0.05
KRT20P35900 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.73□□□□□ -0.05
KRT20P35900 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.73□□□□□ -0.05
KRT20P35900 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
KRT20P35900 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
KRT20P35900 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
KRT20P35900 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
KRT20P35900 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.73□□□□□ -0.05
KRT20P35900 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.73□□□□□ -0.05
KRT20P35900 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.73□□□□□ -0.05
KRT20P35900 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.73□□□□□ -0.05
KRT20P35900 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.73□□□□□ -0.05
KRT20P35900 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
KRT20P35900 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
KRT20P35900 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
KRT20P35900 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
KRT20P35900 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.73□□□□□ -0.05
KRT20P35900 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
KRT20P35900 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
KRT20P35900 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.73□□□□□ -0.05
KRT20P35900 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
KRT20P35900 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
KRT20P35900 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KRT20P35900 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
KRT20P35900 AC092127.1-201ENST00000567093 3455 ntBASIC14.72□□□□□ -0.05
KRT20P35900 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.72□□□□□ -0.05
KRT20P35900 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
KRT20P35900 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
KRT20P35900 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.72□□□□□ -0.05
KRT20P35900 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
KRT20P35900 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.72□□□□□ -0.05
KRT20P35900 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
KRT20P35900 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
KRT20P35900 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
KRT20P35900 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
KRT20P35900 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.72□□□□□ -0.05
KRT20P35900 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
KRT20P35900 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
KRT20P35900 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
KRT20P35900 AL512638.1-201ENST00000457493 794 ntBASIC14.72□□□□□ -0.05
KRT20P35900 PHKG1P2-201ENST00000457537 863 ntBASIC14.72□□□□□ -0.05
KRT20P35900 RN7SL618P-201ENST00000477850 296 ntBASIC14.72□□□□□ -0.05
KRT20P35900 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.72□□□□□ -0.05
KRT20P35900 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.72□□□□□ -0.05
KRT20P35900 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.72□□□□□ -0.05
KRT20P35900 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.72□□□□□ -0.05
KRT20P35900 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.72□□□□□ -0.05
KRT20P35900 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
KRT20P35900 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms