Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RFC1P35251 LINC00528-201ENST00000600723 2160 ntBASIC16.27■□□□□ 0.19
RFC1P35251 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFC1P35251 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFC1P35251 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RFC1P35251 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.27■□□□□ 0.19
RFC1P35251 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFC1P35251 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFC1P35251 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFC1P35251 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFC1P35251 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFC1P35251 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFC1P35251 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC1P35251 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC1P35251 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFC1P35251 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.26■□□□□ 0.19
RFC1P35251 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFC1P35251 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFC1P35251 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC1P35251 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC1P35251 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC1P35251 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC1P35251 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RFC1P35251 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.26■□□□□ 0.19
RFC1P35251 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC1P35251 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC1P35251 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC1P35251 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFC1P35251 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC1P35251 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFC1P35251 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC1P35251 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.26■□□□□ 0.19
RFC1P35251 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.26■□□□□ 0.19
RFC1P35251 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFC1P35251 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.26■□□□□ 0.19
RFC1P35251 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.26■□□□□ 0.19
RFC1P35251 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.26■□□□□ 0.19
RFC1P35251 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFC1P35251 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.26■□□□□ 0.19
RFC1P35251 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.26■□□□□ 0.19
RFC1P35251 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RFC1P35251 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RFC1P35251 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RFC1P35251 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RFC1P35251 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RFC1P35251 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.26■□□□□ 0.19
RFC1P35251 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.26■□□□□ 0.19
RFC1P35251 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RFC1P35251 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC1P35251 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC1P35251 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC1P35251 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC1P35251 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFC1P35251 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFC1P35251 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RFC1P35251 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFC1P35251 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RFC1P35251 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFC1P35251 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFC1P35251 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RFC1P35251 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RFC1P35251 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RFC1P35251 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFC1P35251 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFC1P35251 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RFC1P35251 MIR770-201ENST00000390219 98 ntBASIC16.25■□□□□ 0.19
RFC1P35251 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFC1P35251 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.25■□□□□ 0.19
RFC1P35251 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RFC1P35251 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.25■□□□□ 0.19
RFC1P35251 GHSR-202ENST00000427970 912 ntBASIC16.25■□□□□ 0.19
RFC1P35251 GNAQP1-201ENST00000444815 1067 ntBASIC16.25■□□□□ 0.19
RFC1P35251 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.25■□□□□ 0.19
RFC1P35251 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.25■□□□□ 0.19
RFC1P35251 INGX-202ENST00000489074 768 ntBASIC16.25■□□□□ 0.19
RFC1P35251 DOC2GP-202ENST00000514950 1163 ntBASIC16.25■□□□□ 0.19
RFC1P35251 AC023310.3-201ENST00000557027 670 ntBASIC16.25■□□□□ 0.19
RFC1P35251 AC100756.1-201ENST00000562736 682 ntBASIC16.25■□□□□ 0.19
RFC1P35251 AC138749.3-201ENST00000567691 622 ntBASIC16.25■□□□□ 0.19
RFC1P35251 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.25■□□□□ 0.19
RFC1P35251 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.25■□□□□ 0.19
RFC1P35251 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.25■□□□□ 0.19
RFC1P35251 AC116165.1-201ENST00000611806 668 ntBASIC16.25■□□□□ 0.19
RFC1P35251 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.25■□□□□ 0.19
RFC1P35251 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFC1P35251 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
RFC1P35251 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.25■□□□□ 0.19
RFC1P35251 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFC1P35251 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFC1P35251 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFC1P35251 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
RFC1P35251 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFC1P35251 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RFC1P35251 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RFC1P35251 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.25■□□□□ 0.19
RFC1P35251 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.25■□□□□ 0.19
RFC1P35251 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFC1P35251 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFC1P35251 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFC1P35251 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms