Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
DEFA4P12838 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.62□□□□□ -0.39
DEFA4P12838 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
DEFA4P12838 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.62□□□□□ -0.39
DEFA4P12838 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.62□□□□□ -0.39
DEFA4P12838 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
DEFA4P12838 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
DEFA4P12838 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
DEFA4P12838 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
DEFA4P12838 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.62□□□□□ -0.39
DEFA4P12838 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.62□□□□□ -0.39
DEFA4P12838 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
DEFA4P12838 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.62□□□□□ -0.39
DEFA4P12838 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
DEFA4P12838 AL353705.2-201ENST00000428243 662 ntBASIC12.62□□□□□ -0.39
DEFA4P12838 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.62□□□□□ -0.39
DEFA4P12838 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.62□□□□□ -0.39
DEFA4P12838 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
DEFA4P12838 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.62□□□□□ -0.39
DEFA4P12838 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.62□□□□□ -0.39
DEFA4P12838 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.62□□□□□ -0.39
DEFA4P12838 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.62□□□□□ -0.39
DEFA4P12838 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.62□□□□□ -0.39
DEFA4P12838 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.62□□□□□ -0.39
DEFA4P12838 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.62□□□□□ -0.39
DEFA4P12838 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
DEFA4P12838 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 LINC01230-201ENST00000625222 3017 ntBASIC12.62□□□□□ -0.39
DEFA4P12838 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.62□□□□□ -0.39
DEFA4P12838 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 AC015656.1-201ENST00000624209 3578 ntBASIC12.62□□□□□ -0.39
DEFA4P12838 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.62□□□□□ -0.39
DEFA4P12838 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
DEFA4P12838 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.62□□□□□ -0.39
DEFA4P12838 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.62□□□□□ -0.39
DEFA4P12838 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DEFA4P12838 AC126335.2-201ENST00000623362 4637 ntBASIC12.61□□□□□ -0.39
DEFA4P12838 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.61□□□□□ -0.39
DEFA4P12838 AC232323.1-201ENST00000540724 2099 ntBASIC12.61□□□□□ -0.39
DEFA4P12838 REXO1L5P-201ENST00000622260 2098 ntBASIC12.61□□□□□ -0.39
DEFA4P12838 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA4P12838 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA4P12838 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.61□□□□□ -0.39
DEFA4P12838 REXO1L1P-202ENST00000608646 1974 ntBASIC12.61□□□□□ -0.39
DEFA4P12838 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.61□□□□□ -0.39
DEFA4P12838 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.61□□□□□ -0.39
DEFA4P12838 LINC01101-201ENST00000622953 1884 ntBASIC12.61□□□□□ -0.39
DEFA4P12838 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA4P12838 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.61□□□□□ -0.39
DEFA4P12838 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA4P12838 BNIP3P1-202ENST00000550043 1585 ntBASIC12.61□□□□□ -0.39
DEFA4P12838 AP3S2-216ENST00000617003 1561 ntBASIC12.61□□□□□ -0.39
DEFA4P12838 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
DEFA4P12838 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA4P12838 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.61□□□□□ -0.39
DEFA4P12838 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA4P12838 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.61□□□□□ -0.39
DEFA4P12838 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
DEFA4P12838 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA4P12838 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA4P12838 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA4P12838 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA4P12838 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA4P12838 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
DEFA4P12838 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA4P12838 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
DEFA4P12838 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA4P12838 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DEFA4P12838 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms