Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBP1P09455 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.22■□□□□ 0.03
RBP1P09455 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RBP1P09455 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBP1P09455 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RBP1P09455 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RBP1P09455 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RBP1P09455 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RBP1P09455 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBP1P09455 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBP1P09455 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RBP1P09455 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.22■□□□□ 0.03
RBP1P09455 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBP1P09455 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.22■□□□□ 0.03
RBP1P09455 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.22■□□□□ 0.03
RBP1P09455 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.22■□□□□ 0.03
RBP1P09455 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RBP1P09455 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBP1P09455 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.22■□□□□ 0.03
RBP1P09455 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.22■□□□□ 0.03
RBP1P09455 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RBP1P09455 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
RBP1P09455 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBP1P09455 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.22■□□□□ 0.03
RBP1P09455 AF228730.6-201ENST00000641497 218 ntBASIC15.22■□□□□ 0.03
RBP1P09455 AC084121.3-201ENST00000641716 218 ntBASIC15.22■□□□□ 0.03
RBP1P09455 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBP1P09455 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.22■□□□□ 0.03
RBP1P09455 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RBP1P09455 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBP1P09455 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBP1P09455 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RBP1P09455 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RBP1P09455 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBP1P09455 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBP1P09455 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RBP1P09455 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBP1P09455 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBP1P09455 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.22■□□□□ 0.03
RBP1P09455 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RBP1P09455 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
RBP1P09455 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.22■□□□□ 0.03
RBP1P09455 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RBP1P09455 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.21■□□□□ 0.03
RBP1P09455 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RBP1P09455 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.21■□□□□ 0.03
RBP1P09455 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RBP1P09455 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RBP1P09455 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.21■□□□□ 0.03
RBP1P09455 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.21■□□□□ 0.03
RBP1P09455 AC138969.3-201ENST00000546612 1459 ntBASIC15.21■□□□□ 0.03
RBP1P09455 AC138932.2-201ENST00000548268 1459 ntBASIC15.21■□□□□ 0.03
RBP1P09455 AC126755.4-201ENST00000549796 1459 ntBASIC15.21■□□□□ 0.03
RBP1P09455 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.21■□□□□ 0.03
RBP1P09455 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RBP1P09455 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.21■□□□□ 0.03
RBP1P09455 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RBP1P09455 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.21■□□□□ 0.03
RBP1P09455 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RBP1P09455 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
RBP1P09455 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RBP1P09455 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RBP1P09455 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RBP1P09455 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RBP1P09455 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RBP1P09455 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.21■□□□□ 0.03
RBP1P09455 AC074044.1-201ENST00000609673 707 ntBASIC15.21■□□□□ 0.03
RBP1P09455 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.21■□□□□ 0.03
RBP1P09455 AC007191.1-201ENST00000623179 2995 ntBASIC15.21■□□□□ 0.03
RBP1P09455 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RBP1P09455 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.21■□□□□ 0.03
RBP1P09455 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.21■□□□□ 0.03
RBP1P09455 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.21■□□□□ 0.03
RBP1P09455 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RBP1P09455 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RBP1P09455 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RBP1P09455 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RBP1P09455 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.21■□□□□ 0.02
RBP1P09455 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RBP1P09455 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.21■□□□□ 0.02
RBP1P09455 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
RBP1P09455 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RBP1P09455 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RBP1P09455 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RBP1P09455 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.2■□□□□ 0.02
RBP1P09455 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RBP1P09455 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBP1P09455 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBP1P09455 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBP1P09455 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBP1P09455 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBP1P09455 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RBP1P09455 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBP1P09455 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBP1P09455 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RBP1P09455 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBP1P09455 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBP1P09455 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.2■□□□□ 0.02
RBP1P09455 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.2■□□□□ 0.02
RBP1P09455 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms