Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.54□□□□□ -0.24
LCATP04180 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.54□□□□□ -0.24
LCATP04180 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.54□□□□□ -0.24
LCATP04180 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LCATP04180 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
LCATP04180 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LCATP04180 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LCATP04180 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.54□□□□□ -0.24
LCATP04180 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LCATP04180 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LCATP04180 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.53□□□□□ -0.24
LCATP04180 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LCATP04180 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.53□□□□□ -0.24
LCATP04180 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.53□□□□□ -0.24
LCATP04180 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LCATP04180 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
LCATP04180 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.53□□□□□ -0.24
LCATP04180 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.53□□□□□ -0.24
LCATP04180 AL133267.1-201ENST00000398220 340 ntBASIC13.53□□□□□ -0.24
LCATP04180 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.53□□□□□ -0.24
LCATP04180 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.53□□□□□ -0.24
LCATP04180 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.53□□□□□ -0.24
LCATP04180 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.53□□□□□ -0.24
LCATP04180 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.53□□□□□ -0.24
LCATP04180 AL512638.1-201ENST00000457493 794 ntBASIC13.53□□□□□ -0.24
LCATP04180 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.53□□□□□ -0.24
LCATP04180 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.53□□□□□ -0.24
LCATP04180 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.53□□□□□ -0.24
LCATP04180 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.53□□□□□ -0.24
LCATP04180 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.53□□□□□ -0.24
LCATP04180 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.53□□□□□ -0.24
LCATP04180 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.53□□□□□ -0.24
LCATP04180 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.53□□□□□ -0.24
LCATP04180 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.53□□□□□ -0.24
LCATP04180 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LCATP04180 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LCATP04180 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.53□□□□□ -0.24
LCATP04180 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.53□□□□□ -0.24
LCATP04180 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
LCATP04180 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.53□□□□□ -0.24
LCATP04180 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.53□□□□□ -0.24
LCATP04180 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.53□□□□□ -0.24
LCATP04180 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LCATP04180 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 CICP11-201ENST00000434745 2827 ntBASIC13.53□□□□□ -0.24
LCATP04180 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LCATP04180 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LCATP04180 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LCATP04180 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LCATP04180 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LCATP04180 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LCATP04180 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LCATP04180 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
LCATP04180 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LCATP04180 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LCATP04180 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LCATP04180 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
LCATP04180 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LCATP04180 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LCATP04180 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
LCATP04180 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LCATP04180 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
LCATP04180 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LCATP04180 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LCATP04180 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LCATP04180 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LCATP04180 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.52□□□□□ -0.25
LCATP04180 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LCATP04180 AC055876.3-201ENST00000431496 288 ntBASIC13.52□□□□□ -0.25
LCATP04180 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.52□□□□□ -0.25
LCATP04180 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.52□□□□□ -0.25
LCATP04180 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms