Protein–RNA interactions for Protein: O60293

ZFC3H1, Zinc finger C3H1 domain-containing protein, humanhuman

Known RBP Predictions only

Length 1,989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1O60293 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 AC011495.1-201ENST00000498085 584 ntBASIC15.18■□□□□ 0.02
ZFC3H1O60293 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 AC104457.1-201ENST00000401024 814 ntBASIC15.18■□□□□ 0.02
ZFC3H1O60293 RPL5P21-201ENST00000404620 815 ntBASIC15.18■□□□□ 0.02
ZFC3H1O60293 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.18■□□□□ 0.02
ZFC3H1O60293 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZFC3H1O60293 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
ZFC3H1O60293 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZFC3H1O60293 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.17■□□□□ 0.02
ZFC3H1O60293 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZFC3H1O60293 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.17■□□□□ 0.02
ZFC3H1O60293 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ZFC3H1O60293 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZFC3H1O60293 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ZFC3H1O60293 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
ZFC3H1O60293 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZFC3H1O60293 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.17■□□□□ 0.02
ZFC3H1O60293 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZFC3H1O60293 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
ZFC3H1O60293 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
ZFC3H1O60293 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
ZFC3H1O60293 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
ZFC3H1O60293 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.17■□□□□ 0.02
ZFC3H1O60293 AC092658.1-201ENST00000505836 891 ntBASIC15.17■□□□□ 0.02
ZFC3H1O60293 TDH-203ENST00000531764 1110 ntBASIC15.17■□□□□ 0.02
ZFC3H1O60293 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
ZFC3H1O60293 AL022328.1-201ENST00000610050 478 ntBASIC15.17■□□□□ 0.02
ZFC3H1O60293 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ZFC3H1O60293 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.17■□□□□ 0.02
ZFC3H1O60293 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZFC3H1O60293 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZFC3H1O60293 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.17■□□□□ 0.02
ZFC3H1O60293 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZFC3H1O60293 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZFC3H1O60293 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
ZFC3H1O60293 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZFC3H1O60293 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ZFC3H1O60293 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZFC3H1O60293 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZFC3H1O60293 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.17■□□□□ 0.02
ZFC3H1O60293 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.17■□□□□ 0.02
ZFC3H1O60293 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.17■□□□□ 0.02
ZFC3H1O60293 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.17■□□□□ 0.02
ZFC3H1O60293 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
ZFC3H1O60293 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
ZFC3H1O60293 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZFC3H1O60293 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZFC3H1O60293 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
ZFC3H1O60293 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.16■□□□□ 0.02
ZFC3H1O60293 CSF2RBP1-201ENST00000447905 391 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms