Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.63□□□□□ -0.39
SSSCA1O60232 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SSSCA1O60232 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.63□□□□□ -0.39
SSSCA1O60232 AC092910.1-201ENST00000482027 1129 ntBASIC12.63□□□□□ -0.39
SSSCA1O60232 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.63□□□□□ -0.39
SSSCA1O60232 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC12.63□□□□□ -0.39
SSSCA1O60232 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.63□□□□□ -0.39
SSSCA1O60232 TCAP-202ENST00000578283 583 ntTSL 5 BASIC12.63□□□□□ -0.39
SSSCA1O60232 AC023141.13-201ENST00000604991 943 ntBASIC12.63□□□□□ -0.39
SSSCA1O60232 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.63□□□□□ -0.39
SSSCA1O60232 SPTSSB-204ENST00000617024 1292 ntBASIC12.63□□□□□ -0.39
SSSCA1O60232 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.63□□□□□ -0.39
SSSCA1O60232 AL161645.1-201ENST00000622716 1255 ntBASIC12.63□□□□□ -0.39
SSSCA1O60232 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.63□□□□□ -0.39
SSSCA1O60232 AC018529.2-202ENST00000611482 3087 ntBASIC12.63□□□□□ -0.39
SSSCA1O60232 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
SSSCA1O60232 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.63□□□□□ -0.39
SSSCA1O60232 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.63□□□□□ -0.39
SSSCA1O60232 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.63□□□□□ -0.39
SSSCA1O60232 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.63□□□□□ -0.39
SSSCA1O60232 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SSSCA1O60232 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSSCA1O60232 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SSSCA1O60232 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SSSCA1O60232 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSSCA1O60232 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSSCA1O60232 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.62□□□□□ -0.39
SSSCA1O60232 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.62□□□□□ -0.39
SSSCA1O60232 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.62□□□□□ -0.39
SSSCA1O60232 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.62□□□□□ -0.39
SSSCA1O60232 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSSCA1O60232 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SSSCA1O60232 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.62□□□□□ -0.39
SSSCA1O60232 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SSSCA1O60232 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.62□□□□□ -0.39
SSSCA1O60232 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSSCA1O60232 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SSSCA1O60232 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSSCA1O60232 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSSCA1O60232 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SSSCA1O60232 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SSSCA1O60232 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.62□□□□□ -0.39
SSSCA1O60232 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.62□□□□□ -0.39
SSSCA1O60232 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSSCA1O60232 DMBT1P1-203ENST00000636837 4628 ntBASIC12.62□□□□□ -0.39
SSSCA1O60232 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSSCA1O60232 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SSSCA1O60232 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSSCA1O60232 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SSSCA1O60232 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.62□□□□□ -0.39
SSSCA1O60232 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.62□□□□□ -0.39
SSSCA1O60232 CRYGEP-201ENST00000412192 528 ntBASIC12.62□□□□□ -0.39
SSSCA1O60232 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.62□□□□□ -0.39
SSSCA1O60232 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.62□□□□□ -0.39
SSSCA1O60232 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.62□□□□□ -0.39
SSSCA1O60232 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.62□□□□□ -0.39
SSSCA1O60232 RNA5SP410-201ENST00000516285 106 ntBASIC12.62□□□□□ -0.39
SSSCA1O60232 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSSCA1O60232 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SSSCA1O60232 HNRNPUP1-201ENST00000554987 333 ntBASIC12.62□□□□□ -0.39
SSSCA1O60232 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SSSCA1O60232 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSSCA1O60232 AC007064.4-201ENST00000637740 555 ntBASIC12.62□□□□□ -0.39
SSSCA1O60232 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.62□□□□□ -0.39
SSSCA1O60232 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSSCA1O60232 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.62□□□□□ -0.39
SSSCA1O60232 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSSCA1O60232 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSSCA1O60232 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SSSCA1O60232 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSSCA1O60232 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.62□□□□□ -0.39
SSSCA1O60232 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSSCA1O60232 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSSCA1O60232 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSSCA1O60232 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSSCA1O60232 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms