Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOX1O00570 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SOX1O00570 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SOX1O00570 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.09■□□□□ 0.17
SOX1O00570 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOX1O00570 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC16.09■□□□□ 0.17
SOX1O00570 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOX1O00570 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC16.09■□□□□ 0.17
SOX1O00570 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC16.09■□□□□ 0.17
SOX1O00570 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.09■□□□□ 0.17
SOX1O00570 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SOX1O00570 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.09■□□□□ 0.17
SOX1O00570 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC16.09■□□□□ 0.17
SOX1O00570 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC16.09■□□□□ 0.17
SOX1O00570 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC16.09■□□□□ 0.17
SOX1O00570 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.09■□□□□ 0.17
SOX1O00570 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC16.09■□□□□ 0.17
SOX1O00570 Z98259.2-201ENST00000641583 609 ntBASIC16.09■□□□□ 0.17
SOX1O00570 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.09■□□□□ 0.17
SOX1O00570 KRT18P9-201ENST00000604826 1300 ntBASIC16.09■□□□□ 0.17
SOX1O00570 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SOX1O00570 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.09■□□□□ 0.17
SOX1O00570 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOX1O00570 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SOX1O00570 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.09■□□□□ 0.17
SOX1O00570 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
SOX1O00570 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SOX1O00570 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
SOX1O00570 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOX1O00570 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SOX1O00570 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC16.09■□□□□ 0.17
SOX1O00570 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SOX1O00570 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.09■□□□□ 0.17
SOX1O00570 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SOX1O00570 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
SOX1O00570 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SOX1O00570 AC022188.1-201ENST00000620960 1664 ntBASIC16.08■□□□□ 0.17
SOX1O00570 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SOX1O00570 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.08■□□□□ 0.17
SOX1O00570 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SOX1O00570 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.08■□□□□ 0.16
SOX1O00570 NHP2P1-201ENST00000335274 462 ntBASIC16.08■□□□□ 0.16
SOX1O00570 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SOX1O00570 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOX1O00570 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SOX1O00570 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC16.08■□□□□ 0.16
SOX1O00570 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC16.08■□□□□ 0.16
SOX1O00570 AC004066.1-201ENST00000502488 802 ntBASIC16.08■□□□□ 0.16
SOX1O00570 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.08■□□□□ 0.16
SOX1O00570 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC16.08■□□□□ 0.16
SOX1O00570 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.08■□□□□ 0.16
SOX1O00570 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.08■□□□□ 0.16
SOX1O00570 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
SOX1O00570 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
SOX1O00570 RPS5-204ENST00000598098 536 ntTSL 2 BASIC16.08■□□□□ 0.16
SOX1O00570 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.08■□□□□ 0.16
SOX1O00570 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOX1O00570 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.08■□□□□ 0.16
SOX1O00570 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.08■□□□□ 0.16
SOX1O00570 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.08■□□□□ 0.16
SOX1O00570 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.08■□□□□ 0.16
SOX1O00570 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.08■□□□□ 0.16
SOX1O00570 LINC01165-201ENST00000445190 1623 ntBASIC16.08■□□□□ 0.16
SOX1O00570 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
SOX1O00570 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOX1O00570 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SOX1O00570 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.08■□□□□ 0.16
SOX1O00570 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOX1O00570 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOX1O00570 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SOX1O00570 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SOX1O00570 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.07■□□□□ 0.16
SOX1O00570 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX1O00570 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX1O00570 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX1O00570 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX1O00570 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.07■□□□□ 0.16
SOX1O00570 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX1O00570 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX1O00570 SURF4-203ENST00000371991 715 ntTSL 3 BASIC16.07■□□□□ 0.16
SOX1O00570 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC16.07■□□□□ 0.16
SOX1O00570 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SOX1O00570 HLA-DMA-203ENST00000395305 777 ntBASIC16.07■□□□□ 0.16
SOX1O00570 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SOX1O00570 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC16.07■□□□□ 0.16
SOX1O00570 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SOX1O00570 RPSAP15-201ENST00000448168 861 ntBASIC16.07■□□□□ 0.16
SOX1O00570 DPY19L2P5-201ENST00000456300 331 ntBASIC16.07■□□□□ 0.16
SOX1O00570 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC16.07■□□□□ 0.16
SOX1O00570 IGKV1OR-2-201ENST00000457995 350 ntBASIC16.07■□□□□ 0.16
SOX1O00570 RN7SL846P-201ENST00000467429 292 ntBASIC16.07■□□□□ 0.16
SOX1O00570 RBM4-207ENST00000506523 654 ntTSL 3 BASIC16.07■□□□□ 0.16
SOX1O00570 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.07■□□□□ 0.16
SOX1O00570 AC106047.2-201ENST00000511723 743 ntBASIC16.07■□□□□ 0.16
SOX1O00570 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.07■□□□□ 0.16
SOX1O00570 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC16.07■□□□□ 0.16
SOX1O00570 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC16.07■□□□□ 0.16
SOX1O00570 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
SOX1O00570 AC010632.2-201ENST00000588369 1224 ntBASIC16.07■□□□□ 0.16
SOX1O00570 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms