Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 AL589739.1-201ENST00000607720 493 ntBASIC14.57□□□□□ -0.08
CLIC1O00299 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.57□□□□□ -0.08
CLIC1O00299 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.57□□□□□ -0.08
CLIC1O00299 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.57□□□□□ -0.08
CLIC1O00299 AL645728.2-202ENST00000641679 227 ntBASIC14.57□□□□□ -0.08
CLIC1O00299 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLIC1O00299 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLIC1O00299 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.57□□□□□ -0.08
CLIC1O00299 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CLIC1O00299 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLIC1O00299 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLIC1O00299 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.57□□□□□ -0.08
CLIC1O00299 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.57□□□□□ -0.08
CLIC1O00299 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CLIC1O00299 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLIC1O00299 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLIC1O00299 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.57□□□□□ -0.08
CLIC1O00299 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.57□□□□□ -0.08
CLIC1O00299 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.57□□□□□ -0.08
CLIC1O00299 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CLIC1O00299 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.57□□□□□ -0.08
CLIC1O00299 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLIC1O00299 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.57□□□□□ -0.08
CLIC1O00299 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLIC1O00299 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.57□□□□□ -0.08
CLIC1O00299 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.57□□□□□ -0.08
CLIC1O00299 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CLIC1O00299 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
CLIC1O00299 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.56□□□□□ -0.08
CLIC1O00299 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.56□□□□□ -0.08
CLIC1O00299 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
CLIC1O00299 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.56□□□□□ -0.08
CLIC1O00299 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 CETN4P-206ENST00000642099 2168 ntBASIC14.56□□□□□ -0.08
CLIC1O00299 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CLIC1O00299 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.56□□□□□ -0.08
CLIC1O00299 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.56□□□□□ -0.08
CLIC1O00299 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.56□□□□□ -0.08
CLIC1O00299 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.56□□□□□ -0.08
CLIC1O00299 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.56□□□□□ -0.08
CLIC1O00299 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.56□□□□□ -0.08
CLIC1O00299 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.56□□□□□ -0.08
CLIC1O00299 AL033527.5-202ENST00000641632 1098 ntBASIC14.56□□□□□ -0.08
CLIC1O00299 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
CLIC1O00299 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
CLIC1O00299 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.56□□□□□ -0.08
CLIC1O00299 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CLIC1O00299 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.56□□□□□ -0.08
CLIC1O00299 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLIC1O00299 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLIC1O00299 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLIC1O00299 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLIC1O00299 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLIC1O00299 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLIC1O00299 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CLIC1O00299 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLIC1O00299 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLIC1O00299 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLIC1O00299 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
CLIC1O00299 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLIC1O00299 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.55□□□□□ -0.08
CLIC1O00299 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLIC1O00299 REXO1L4P-201ENST00000605109 1937 ntBASIC14.55□□□□□ -0.08
CLIC1O00299 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLIC1O00299 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CLIC1O00299 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLIC1O00299 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLIC1O00299 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLIC1O00299 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLIC1O00299 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.55□□□□□ -0.08
CLIC1O00299 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLIC1O00299 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CLIC1O00299 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLIC1O00299 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms