Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC144AA2RUR9 SSR4P1-203ENST00000599569 2260 ntBASIC21.82■■□□□ 1.08
CCDC144AA2RUR9 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC144AA2RUR9 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
CCDC144AA2RUR9 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC144AA2RUR9 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC144AA2RUR9 ACTG1P17-201ENST00000558391 1119 ntBASIC21.82■■□□□ 1.08
CCDC144AA2RUR9 AL451050.2-201ENST00000606967 682 ntBASIC21.82■■□□□ 1.08
CCDC144AA2RUR9 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC144AA2RUR9 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC144AA2RUR9 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC144AA2RUR9 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC21.82■■□□□ 1.08
CCDC144AA2RUR9 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC144AA2RUR9 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC144AA2RUR9 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
CCDC144AA2RUR9 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC144AA2RUR9 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
CCDC144AA2RUR9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC144AA2RUR9 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC21.82■■□□□ 1.08
CCDC144AA2RUR9 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 SERPINA13P-202ENST00000478994 924 ntBASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 AC244452.3-201ENST00000636814 210 ntBASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 AC002472.3-201ENST00000640124 621 ntBASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 AL138725.1-201ENST00000407347 1314 ntBASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC144AA2RUR9 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 HIST2H2BC-201ENST00000498492 580 ntBASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 CDC23-208ENST00000505120 455 ntTSL 3 BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 DIO1-215ENST00000610607 796 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 RETN-203ENST00000629642 400 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 AKR7A2P1-201ENST00000460134 915 ntBASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 AC044849.1-201ENST00000519737 1188 ntBASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
CCDC144AA2RUR9 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CCDC144AA2RUR9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms