Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC004066.1-201ENST00000502488 802 ntBASIC14.77□□□□□ -0.05
PCDHGA1Q9Y5H4 AC044849.1-201ENST00000519737 1188 ntBASIC14.77□□□□□ -0.05
PCDHGA1Q9Y5H4 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.77□□□□□ -0.05
PCDHGA1Q9Y5H4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.77□□□□□ -0.05
PCDHGA1Q9Y5H4 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.77□□□□□ -0.05
PCDHGA1Q9Y5H4 AL023803.2-201ENST00000620080 638 ntBASIC14.77□□□□□ -0.05
PCDHGA1Q9Y5H4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.77□□□□□ -0.05
PCDHGA1Q9Y5H4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA1Q9Y5H4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.77□□□□□ -0.05
PCDHGA1Q9Y5H4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA1Q9Y5H4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA1Q9Y5H4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA1Q9Y5H4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.77□□□□□ -0.05
PCDHGA1Q9Y5H4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA1Q9Y5H4 AC079328.2-201ENST00000561241 3354 ntBASIC14.77□□□□□ -0.05
PCDHGA1Q9Y5H4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA1Q9Y5H4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA1Q9Y5H4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA1Q9Y5H4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
PCDHGA1Q9Y5H4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDHGA1Q9Y5H4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.77□□□□□ -0.05
PCDHGA1Q9Y5H4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 TUBBP5-203ENST00000508529 1334 ntBASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 Z97180.1-201ENST00000445173 988 ntBASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 SPTLC1P5-201ENST00000450718 252 ntBASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 MIR4313-201ENST00000580760 101 ntBASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 SPCS2P2-201ENST00000603270 608 ntBASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
PCDHGA1Q9Y5H4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 FTLP1-201ENST00000449155 526 ntBASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 AL353726.2-201ENST00000623259 884 ntBASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA1Q9Y5H4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms