Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 REXO1L6P-201ENST00000603433 1515 ntBASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 RRP7BP-205ENST00000566851 833 ntBASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 AC025048.3-201ENST00000590609 569 ntBASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 TMEM261P1-201ENST00000604899 340 ntBASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 AC005702.4-201ENST00000618393 416 ntBASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 AL033527.5-201ENST00000641382 801 ntBASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
FNDC3AQ9Y2H6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 CLK3P2-201ENST00000427566 1453 ntBASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 TARDBPP1-201ENST00000442013 1203 ntBASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
FNDC3AQ9Y2H6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
FNDC3AQ9Y2H6 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.8■□□□□ 0.12
FNDC3AQ9Y2H6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.8■□□□□ 0.12
FNDC3AQ9Y2H6 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FNDC3AQ9Y2H6 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FNDC3AQ9Y2H6 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FNDC3AQ9Y2H6 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms