Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 AL133338.1-201ENST00000565695 1517 ntBASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 RN7SKP230-201ENST00000365642 335 ntBASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 AL118558.3-201ENST00000607414 1079 ntBASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 AP001002.3-201ENST00000623482 206 ntBASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 PKD1P1-201ENST00000458669 6805 ntBASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SYNPO2Q9UMS6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SYNPO2Q9UMS6 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SYNPO2Q9UMS6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.52■□□□□ 0.39
SYNPO2Q9UMS6 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
SYNPO2Q9UMS6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SYNPO2Q9UMS6 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SYNPO2Q9UMS6 AC023024.2-201ENST00000623561 1993 ntBASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 AC010141.1-201ENST00000411585 623 ntBASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 AC126915.1-201ENST00000522847 1038 ntBASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SYNPO2Q9UMS6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.5■□□□□ 0.39
SYNPO2Q9UMS6 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms