Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 AL805961.1-201ENST00000642026 753 ntBASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC52A1Q9NWF4 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 CYP2T1P-202ENST00000641596 2535 ntBASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 NME2-201ENST00000393183 568 ntTSL 2 BASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 PGAM1P5-201ENST00000548011 764 ntBASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 AC087045.2-201ENST00000606279 1003 ntBASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC21.63■■□□□ 1.05
SLC52A1Q9NWF4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 AC105250.1-201ENST00000509378 2057 ntBASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 AL627231.1-201ENST00000394467 1125 ntBASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 AC026803.1-201ENST00000569130 274 ntBASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 AC103810.10-201ENST00000606504 343 ntBASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 AC092171.5-201ENST00000608012 942 ntBASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 MIR6720-201ENST00000611664 98 ntBASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 KRT8P21-201ENST00000430398 1491 ntBASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC52A1Q9NWF4 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC21.61■■□□□ 1.05
SLC52A1Q9NWF4 CICP11-201ENST00000434745 2827 ntBASIC21.61■■□□□ 1.05
SLC52A1Q9NWF4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC52A1Q9NWF4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC52A1Q9NWF4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC52A1Q9NWF4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC52A1Q9NWF4 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC52A1Q9NWF4 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC52A1Q9NWF4 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC52A1Q9NWF4 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms