Protein–RNA interactions for Protein: Q9NVI7

ATAD3A, ATPase family AAA domain-containing protein 3A, humanhuman

Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3AQ9NVI7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 MTND6P24-201ENST00000440466 518 ntBASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 SPDYE14P-201ENST00000442619 822 ntBASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 AC023141.5-201ENST00000458585 616 ntBASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 AC093520.2-201ENST00000561830 333 ntBASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 AC026150.2-201ENST00000564693 1156 ntBASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ATAD3AQ9NVI7 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 BX842568.4-201ENST00000421222 227 ntBASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 GPS2P2-201ENST00000430745 888 ntBASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 MIR6080-201ENST00000617359 66 ntBASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATAD3AQ9NVI7 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ATAD3AQ9NVI7 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
ATAD3AQ9NVI7 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATAD3AQ9NVI7 AC023024.2-201ENST00000623561 1993 ntBASIC14.87□□□□□ -0.03
ATAD3AQ9NVI7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
ATAD3AQ9NVI7 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATAD3AQ9NVI7 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
ATAD3AQ9NVI7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATAD3AQ9NVI7 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
ATAD3AQ9NVI7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms